Factsheet for Os07t0508300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006152_P001	Maize	nucleus	38.51	90.54
Zm00001d008747_P001	Maize	nucleus	43.97	90.53
EER99434	Sorghum	cytosol	89.37	89.37
Zm00001d006461_P001	Maize	mitochondrion	87.64	87.64
TraesCS2D01G231700.1	Wheat	cytosol	86.78	87.54
TraesCS2A01G226200.1	Wheat	cytosol	86.49	87.25
TraesCS2B01G249500.1	Wheat	cytosol	86.21	86.96
GSMUA_Achr9P02630_001	Banana	mitochondrion	65.8	72.93
HORVU2Hr1G047840.1	Barley	cytosol	28.45	67.81
KRH42945	Soybean	endoplasmic reticulum	65.52	65.52
VIT_10s0003g02590.t01	Wine grape	cytosol	63.79	63.79
KRH59070	Soybean	cytosol	64.94	63.48
AT4G18060.1	Thale cress	cytosol, mitochondrion	62.64	62.11
CDY01515	Canola	cytosol, mitochondrion	62.07	61.54
Bra012620.1-P	Field mustard	mitochondrion	61.78	61.25
CDX90424	Canola	mitochondrion	61.78	61.25
PGSC0003DMT400007954	Potato	cytosol	61.78	60.91
Solyc02g071330.2.1	Tomato	cytosol	54.02	59.31
Zm00001d022555_P001	Maize	cytosol, mitochondrion	67.24	57.35
Zm00001d022556_P001	Maize	cytosol	60.06	56.03
Os04t0539800-01	Rice	plasma membrane	49.14	46.34
Os10t0512700-01	Rice	plasma membrane	47.7	44.86
GSMUA_Achr6P29510_001	Banana	cytosol	56.9	38.6
Os03t0266700-01	Rice	plasma membrane	42.24	37.31

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	EntrezGene:4343341	InterPro:AH/BAR_dom_sf	EMBL:AK073874
ProteinID:BAC06973.1	ProteinID:BAF21658.1	ProteinID:BAT01689.1	ncoils:Coil	ProteinID:EAZ39952.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267	EnsemblPlantsGene:Os07g0508300	EnsemblPlants:Os07t0508300-01
PFAM:PF14604	PRINTS:PR00499	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	UniProt:Q8LIJ9
InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI00000A33D0
RefSeq:XP_015647585.1	SEG:seg	:	:	:	:

Description

Similar to SH3 domain-containing protein 3. (Os07t0508300-01);Similar to clathrin binding protein. (Os07t0508300-02)

Coordinates

chr7:-:19309976..19315478

Molecular Weight (calculated)

38893.2 Da

IEP (calculated)

7.367

GRAVY (calculated)

-0.517

Length

348 amino acids

Sequence
(BLAST)

001: MDVLRKQASK FKEQVAKQQQ AVIKQFSTTG YEHSDAVVID EVELQRHQQL EKLYTSTRSG RDFQKDIVRA AEGLVSIGIR HVEVGTKFSE DCYRYGGESS
101: ASDEALAKAA SLYGGALRNV EKEYEEFNRI LSSQTIDPLR AMAAGAPLED ARGLAQRYSR MRHEAEILSA EIARRKQRVR EAPLAEHTTK LQQSESKMIE
201: HKASMAVLGK EAAAALAAVE SQQQRITLQR LVGMVEAEKL FHLRLAAILD DVEAEMSSEK QKRESAPPTI HSHKRAEKAQ YFLAEAVHNF NGTTEKELSL
301: IVGDYVVVRQ IAPNGWAEGE CKGVAGWFPA AYVERRENIP PNKVFPQA

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.