Factsheet for GSMUA_Achr9P02630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008747_P001	Maize	nucleus	39.17	72.78
Zm00001d006152_P001	Maize	nucleus	33.76	71.62
Os07t0508300-01	Rice	plasma membrane	72.93	65.8
EER99434	Sorghum	cytosol	71.02	64.08
TraesCS2D01G231700.1	Wheat	cytosol	70.38	64.06
TraesCS2A01G226200.1	Wheat	cytosol	70.06	63.77
TraesCS2B01G249500.1	Wheat	cytosol	69.75	63.48
Zm00001d006461_P001	Maize	mitochondrion	69.43	62.64
VIT_10s0003g02590.t01	Wine grape	cytosol	68.15	61.49
KRH42945	Soybean	endoplasmic reticulum	66.56	60.06
AT4G18060.1	Thale cress	cytosol, mitochondrion	66.88	59.83
CDY01515	Canola	cytosol, mitochondrion	65.92	58.97
Bra012620.1-P	Field mustard	mitochondrion	65.61	58.69
CDX90424	Canola	mitochondrion	65.61	58.69
PGSC0003DMT400007954	Potato	cytosol	64.97	57.79
KRH59070	Soybean	cytosol	65.29	57.58
Solyc02g071330.2.1	Tomato	cytosol	55.73	55.2
HORVU2Hr1G047840.1	Barley	cytosol	23.25	50.0
Zm00001d022555_P001	Maize	cytosol, mitochondrion	58.92	45.34
Zm00001d022556_P001	Maize	cytosol	53.5	45.04
GSMUA_Achr5P19940_001	Banana	cytosol	50.32	42.59
GSMUA_Achr11P...	Banana	cytosol	49.68	42.05
GSMUA_Achr8P11720_001	Banana	cytosol	49.36	41.78
GSMUA_Achr11P...	Banana	cytosol	46.82	39.41
GSMUA_Achr6P29510_001	Banana	cytosol	64.01	39.18
GSMUA_Achr6P01240_001	Banana	cytosol	42.68	28.27
GSMUA_Achr9P02620_001	Banana	cytosol	1.59	9.43

Protein Annotations

EnsemblPlants:GSMUA_Achr9P02630_001	EnsemblPlants:GSMUA_Achr9T02630_001	EnsemblPlantsGene:GSMUA_Achr9G02630_001	Gene3D:1.20.1270.60	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:AH/BAR_dom_sf	InterPro:IPR027267	InterPro:SH3-like_dom_sf	ncoils:Coil	PANTHER:PTHR44109
PANTHER:PTHR44109:SF5	SEG:seg	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI0002957E54	UniProt:M0TWX0
MapMan:35.1	:	:	:	:	:

Description

src homology-3 domain protein 3, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G02630_001]

Coordinates

chr9:-:1877348..1882881

Molecular Weight (calculated)

35088.7 Da

IEP (calculated)

7.391

GRAVY (calculated)

-0.434

Length

314 amino acids

Sequence
(BLAST)

001: MDALRKQASK LREQVAKQAV LKQFSTSGYE SSDVMVIDEV ELQRHQQLEK LYKSTREGRD FQKDIARAAE VYASIGHKHI EIGTKLSEDC YRYGGENHAS
101: GAILAKAAAL YGGSLRNVTK EHEDFGSFLS SQIIEPLKAM ATGAPLEDAR GLAQRYSRLR HEAETLAAEI SRRHSRVRES PILENTAKLQ TSEAKMRELK
201: ANMAVLGKEA AAALAAVESQ QQRQTFQRIL NMVEAEKSFH LRVAAILDDF EAEMVTEKQQ KVSALPSVPS HNRSEKALYF LAEAMYHFNA TSEKELSLVV
301: GDYVVVRQVS FLDA

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.