Factsheet for HORVU2Hr1G047840.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008747_P001	Maize	nucleus	61.64	53.25
Zm00001d006152_P001	Maize	nucleus	48.63	47.97
TraesCS2A01G226200.1	Wheat	cytosol	72.6	30.72
TraesCS2B01G249500.1	Wheat	cytosol	71.92	30.43
TraesCS2D01G231700.1	Wheat	cytosol	69.86	29.57
Os07t0508300-01	Rice	plasma membrane	67.81	28.45
EER99434	Sorghum	cytosol	65.07	27.3
Zm00001d006461_P001	Maize	mitochondrion	64.38	27.01
GSMUA_Achr9P02630_001	Banana	mitochondrion	50.0	23.25
Zm00001d022555_P001	Maize	cytosol, mitochondrion	64.38	23.04
Solyc02g071330.2.1	Tomato	cytosol	48.63	22.4
KRH42945	Soybean	endoplasmic reticulum	47.95	20.11
KRH59070	Soybean	cytosol	48.63	19.94
Bra012620.1-P	Field mustard	mitochondrion	47.95	19.94
CDY01515	Canola	cytosol, mitochondrion	47.95	19.94
CDX90424	Canola	mitochondrion	47.95	19.94
PGSC0003DMT400007954	Potato	cytosol	47.95	19.83
AT4G18060.1	Thale cress	cytosol, mitochondrion	47.26	19.66
VIT_10s0003g02590.t01	Wine grape	cytosol	46.58	19.54
Zm00001d022556_P001	Maize	cytosol	45.89	17.96
HORVU1Hr1G047180.11	Barley	cytosol	36.99	14.52
GSMUA_Achr6P29510_001	Banana	cytosol	50.68	14.43
HORVU2Hr1G092430.1	Barley	cytosol	39.73	14.01
HORVU4Hr1G060770.2	Barley	cytosol	31.51	10.98

Protein Annotations

EnsemblPlants:HORVU2Hr1G047840.1	EnsemblPlantsGene:HORVU2Hr1G047840	Gene3D:2.30.30.40	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:SH3-like_dom_sf	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	SUPFAM:SSF50044	UniParc:UPI000B46F5A8	UniProt:A0A287HXL4
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:263846384..263847928

Molecular Weight (calculated)

16497.0 Da

IEP (calculated)

10.157

GRAVY (calculated)

-0.436

Length

146 amino acids

Sequence
(BLAST)

001: MIDHKARMAV LGKEVVAALG AVESQQKRVT LQCLVGMVEA EKLFYLRLAA ILDDVEAEMS SEKQKRESAP PSRKRAEKSQ YFLAEAVHNF NGTTQKELSL
101: IVGDYVVVRQ VSVPETGRRQ EPPVTRWRPT THARARDIVK LYHGPR

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.