Factsheet for HORVU2Hr1G092430.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G008860.2
HORVU1Hr1G047180.11
HORVU1Hr1G086020.1
HORVU2Hr1G092430.1
HORVU3Hr1G062970.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34660.1	HORVU0Hr1G008860.2	AT2G31260.1	24249832
AT4G34660.1	HORVU3Hr1G062970.2	AT3G61710.1	24249832
AT4G34660.1	HORVU1Hr1G047180.11	AT4G34660.1	24249832
AT4G34660.1	HORVU2Hr1G092430.1	AT4G34660.1	24249832
AT4G34660.1	HORVU1Hr1G086020.1	AT5G11550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G386200.1	Wheat	cytosol	85.75	95.95
TraesCS2B01G406500.2	Wheat	cytosol	85.75	95.95
TraesCS2A01G388400.1	Wheat	cytosol	85.75	95.95
OQU82036	Sorghum	cytosol	78.02	87.77
Zm00001d002810_P001	Maize	plasma membrane	76.81	86.41
Os04t0539800-01	Rice	plasma membrane	76.33	85.64
Zm00001d025955_P001	Maize	cytosol, mitochondrion	74.88	81.79
GSMUA_Achr5P19940_001	Banana	cytosol	64.25	71.7
GSMUA_Achr11P...	Banana	cytosol	63.53	70.89
KRH51472	Soybean	cytosol	63.28	70.62
VIT_03s0038g00460.t01	Wine grape	cytosol	63.04	70.35
GSMUA_Achr8P11720_001	Banana	cytosol	62.56	69.81
KRH29359	Soybean	endoplasmic reticulum	62.32	69.54
Solyc01g110300.2.1	Tomato	nucleus	61.11	68.75
VIT_18s0001g13530.t01	Wine grape	cytosol	60.87	68.48
PGSC0003DMT400008049	Potato	mitochondrion	61.11	68.38
KRH24385	Soybean	endoplasmic reticulum	60.87	67.92
AT4G34660.1	Thale cress	mitochondrion	60.14	67.66
Bra011550.1-P	Field mustard	mitochondrion	59.9	67.21
CDX69077	Canola	mitochondrion	59.9	67.21
CDX75452	Canola	mitochondrion	59.9	67.21
CDY17473	Canola	mitochondrion	59.42	66.85
CDX76295	Canola	cytosol	58.45	65.94
Bra034642.1-P	Field mustard	cytosol	55.8	65.62
Solyc07g032110.2.1	Tomato	cytosol	58.21	65.14
HORVU1Hr1G047180.11	Barley	cytosol	58.45	65.05
PGSC0003DMT400035686	Potato	cytosol	57.73	64.59
KRH60785	Soybean	endoplasmic reticulum	59.9	63.92
Bra010715.1-P	Field mustard	cytosol	56.52	62.73
CDY12114	Canola	cytosol	17.15	59.66
CDX90304	Canola	cytosol	56.52	55.45
CDY12115	Canola	cytosol	56.28	55.08
HORVU2Hr1G047840.1	Barley	cytosol	14.01	39.73
HORVU4Hr1G060770.2	Barley	cytosol	37.92	37.47

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:22.5.4.1.4	UniProt:A0A287IY94	InterPro:AH/BAR_dom_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU2Hr1G092430	EnsemblPlants:HORVU2Hr1G092430.1	InterPro:IPR001452
InterPro:IPR027267	PFAM:PF14604	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF2	InterPro:SH3-like_dom_sf
InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI000B47D788	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:653414730..653422788

Molecular Weight (calculated)

40946.4 Da

IEP (calculated)

6.207

GRAVY (calculated)

-0.473

Length

414 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXMEAL WKQASRLKEQ VARQGVFKQF GAGGNSDNAF TDESEVKLHQ RLEKLYLSTR
101: AAKHFQRDVV RGVEGYIVTG SKQIEIGNKL SDDSQKYGSE NTCTSGNTLS RAATYYGKAR SLIEKERGNM LKAFGTQVAE PLRAMVMGAP LEDARHLAQR
201: YDRIRQEADA QVVEVSRRQS RVRESAGNSD VISKLEAAEY KLEELKSNMV GLGKEAVSAM AAVEGQQQRL TLQRLIAMVE AERTYHQKVL EILDHLEEEM
301: VSERQKIEAP PPPAAESYTS PPPPSYDEVN GMFASTSADQ AVNSVDLFLG EALDSFKAES EFELNLSVGD IVIVRKISSN GWAEGECKGK AGWFPHAYVE
401: RRERVLASKV PHIF

Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.