Factsheet for Bra034642.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000376.1-P
Bra003310.1-P
Bra003466.1-P
Bra008954.1-P
Bra011550.1-P
Bra021714.1-P
Bra023329.1-P
Bra034642.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34660.1	Bra021714.1-P	AT2G31260.1	24249832
AT4G34660.1	Bra000376.1-P	AT2G45170.1	24249832
AT4G34660.1	Bra003310.1-P	AT2G45170.1	24249832
AT4G34660.1	Bra003466.1-P	AT3G61710.1	24249832
AT4G34660.1	Bra011550.1-P	AT4G34660.1	24249832
AT4G34660.1	Bra034642.1-P	AT4G34660.1	24249832
AT4G34660.1	Bra008954.1-P	AT5G11550.1	21798944
AT4G34660.1	Bra023329.1-P	AT5G11550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76295	Canola	cytosol	98.3	94.28
AT4G34660.1	Thale cress	mitochondrion	90.62	86.68
Zm00001d024355_P001	Maize	cytosol	12.78	86.54
Bra011550.1-P	Field mustard	mitochondrion	90.34	86.18
KRH51472	Soybean	cytosol	75.85	71.97
KRH29359	Soybean	endoplasmic reticulum	75.57	71.7
KRH24385	Soybean	endoplasmic reticulum	75.0	71.16
VIT_03s0038g00460.t01	Wine grape	cytosol	73.86	70.08
Solyc01g110300.2.1	Tomato	nucleus	72.44	69.29
PGSC0003DMT400008049	Potato	mitochondrion	72.44	68.92
KRH60785	Soybean	endoplasmic reticulum	75.0	68.04
GSMUA_Achr5P19940_001	Banana	cytosol	71.59	67.92
GSMUA_Achr11P...	Banana	cytosol	70.45	66.85
GSMUA_Achr8P11720_001	Banana	cytosol	69.03	65.5
Bra010715.1-P	Field mustard	cytosol	69.03	65.15
TraesCS1A01G177700.1	Wheat	cytosol	66.48	63.41
EER91379	Sorghum	cytosol	66.48	63.41
Os10t0512700-01	Rice	plasma membrane	66.48	63.24
TraesCS1B01G202500.1	Wheat	cytosol	66.19	63.14
OQU82036	Sorghum	cytosol	65.91	63.04
TraesCS2B01G406500.2	Wheat	cytosol	66.19	62.97
TraesCS1D01G176200.1	Wheat	cytosol	65.91	62.87
TraesCS2A01G388400.1	Wheat	cytosol	65.91	62.7
TraesCS2D01G386200.1	Wheat	cytosol	65.91	62.7
Zm00001d013860_P012	Maize	cytosol	66.48	62.4
Os04t0539800-01	Rice	plasma membrane	65.06	62.06
Zm00001d002810_P001	Maize	plasma membrane	64.77	61.96
GSMUA_Achr11P...	Banana	cytosol	63.92	60.32
Zm00001d032465_P002	Maize	cytosol	66.76	60.1
Zm00001d025955_P001	Maize	cytosol, mitochondrion	64.49	59.89
HORVU1Hr1G047180.11	Barley	cytosol	60.51	57.26
HORVU2Hr1G092430.1	Barley	cytosol	65.62	55.8
Bra012620.1-P	Field mustard	mitochondrion	47.16	47.29
Bra038424.1-P	Field mustard	cytosol	43.47	35.33

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:22.5.4.1.4	InterPro:AH/BAR_dom_sf	EnsemblPlantsGene:Bra034642	EnsemblPlants:Bra034642.1
EnsemblPlants:Bra034642.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452
InterPro:IPR027267	UniProt:M4F0P7	PFAM:PF14604	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF4
InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI0002546395
SEG:seg	:	:	:	:	:

Description

AT4G34660 (E=5e-178) | SH3 domain-containing protein 2 (SH3P2)

Coordinates

chrA08:+:12322138..12324115

Molecular Weight (calculated)

39303.5 Da

IEP (calculated)

6.688

GRAVY (calculated)

-0.619

Length

352 amino acids

Sequence
(BLAST)

001: MVKAVFKQFG GGGHGSGLSD DAELHHHQKL EKLYISTRAA KHYQRDIVRG VEGYIVTGSK QVEVGTKLSE DSRKYGSENT CTNGNVLTRA ALNYGRARAQ
101: MEKERGNMLK ALGTQVAEPL RSMVLGAPLE DARHLAQRYD RMRQEAEAQA TEVARRQAKA RESQGNPDIF MKLESAEAKL QDLKSNMSIL GNEAASALSS
201: VEDQQQKLTL ERLISMVESE RGYHQRVLQI LDQLEGEMVS ERQRIEAPTT PSSTDNMPPP PSYEEVNGVF ASSHMHDTPT DSMRYFLGEV LFPYHGVTNV
301: ELSLSTGEYV VVRKVTGSGW AEGECKGKAG WFPYEYIERR ERVLATKLSE VF

Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.