Factsheet for Bra038424.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27149	Canola	cytosol	100.0	100.0
AT1G31440.1	Thale cress	cytosol	82.91	81.78
KRH76411	Soybean	cytosol	47.11	56.35
VIT_02s0087g00190.t01	Wine grape	cytosol	48.04	56.06
KRH39714	Soybean	cytosol	46.65	55.8
PGSC0003DMT400077295	Potato	cytosol	46.65	55.8
Solyc08g074780.2.1	Tomato	cytosol	46.19	55.25
OQU92866	Sorghum	cytosol	45.73	52.11
TraesCS4B01G211900.1	Wheat	cytosol	42.73	48.56
Os03t0266700-01	Rice	plasma membrane	43.42	47.72
TraesCS4D01G212700.1	Wheat	cytosol	42.49	47.67
TraesCS4A01G092400.1	Wheat	cytosol	42.49	47.67
Bra011550.1-P	Field mustard	mitochondrion	39.26	46.07
Zm00001d028558_P003	Maize	cytosol	41.34	45.32
Bra010715.1-P	Field mustard	cytosol	39.03	45.31
Bra034642.1-P	Field mustard	cytosol	35.33	43.47
Bra012620.1-P	Field mustard	mitochondrion	33.95	41.88
HORVU4Hr1G060770.2	Barley	cytosol	38.57	39.86
GSMUA_Achr6P01240_001	Banana	cytosol	43.19	39.45

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	InterPro:AH/BAR_dom_sf	EnsemblPlantsGene:Bra038424	EnsemblPlants:Bra038424.1
EnsemblPlants:Bra038424.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001452	InterPro:IPR027267	UniProt:M4FBF8
PFAM:PF14604	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF1	InterPro:SH3-like_dom_sf	InterPro:SH3_domain
SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI0002546763	SEG:seg	:

Description

AT1G31440 (E=8e-192) | SH3 domain-containing protein 1 (SH3P1)

Coordinates

chrA08:+:8867655..8869864

Molecular Weight (calculated)

48628.9 Da

IEP (calculated)

6.182

GRAVY (calculated)

-0.797

Length

433 amino acids

Sequence
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQEL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVSHHF GTSYKSVEDG RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD VSEEAYMKLK NSESRLADLK
201: SSMKTLGKEA TKAMLEVDNQ QQSVTYQRLR TLVEAEISYH RNALDILDKL HSEMIAEEEA IESSPKSLPL PLHLEDTVSH PQASHSGESK SNHQGETKHT
301: TPHEEVTKPN PKEDMESSPE VEIKSKPQKE IKSSSPQEDT KTSNGSDDHH SHQQLLSQND SYFLAKVVHP FDAQAPGELS LAVDDYVIVR QVAGTGWSEG
401: EYKGKAGWFP SAYVEKQEKA PASKIVEANL NQQ

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.