CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76411	Soybean	cytosol	95.58	95.58
VIT_02s0087g00190.t01	Wine grape	cytosol	65.19	63.61
Solyc08g074780.2.1	Tomato	cytosol	56.08	56.08
PGSC0003DMT400077295	Potato	cytosol	55.8	55.8
TraesCS4B01G211900.1	Wheat	cytosol	52.21	49.61
TraesCS4D01G212700.1	Wheat	cytosol	52.49	49.22
TraesCS4A01G092400.1	Wheat	cytosol	52.49	49.22
OQU92866	Sorghum	cytosol	51.1	48.68
Os03t0266700-01	Rice	plasma membrane	52.21	47.97
Bra038424.1-P	Field mustard	cytosol	55.8	46.65
CDY27149	Canola	cytosol	55.8	46.65
KRH51472	Soybean	cytosol	47.79	46.63
KRH29359	Soybean	endoplasmic reticulum	47.51	46.36
KRH24385	Soybean	endoplasmic reticulum	47.51	46.36
CDY12418	Canola	cytosol	55.25	46.19
AT1G31440.1	Thale cress	cytosol	55.25	45.56
KRH42945	Soybean	endoplasmic reticulum	43.37	45.11
Zm00001d028558_P003	Maize	cytosol	48.62	44.56
KRH59070	Soybean	cytosol	42.54	43.26
GSMUA_Achr6P01240_001	Banana	cytosol	53.87	41.14
HORVU4Hr1G060770.2	Barley	cytosol	47.24	40.81
KRH60785	Soybean	endoplasmic reticulum	43.37	40.46
CDY12310	Canola	nucleus	13.54	21.97

Protein Annotations

Gene3D:1.20.1270.60	EntrezGene:100819767	Gene3D:2.30.30.40	MapMan:35.1	EMBL:ACUP02005956	InterPro:AH/BAR_dom_sf
ncoils:Coil	EnsemblPlantsGene:GLYMA_09G215800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452
InterPro:IPR027267	UniProt:K7LF98	EnsemblPlants:KRH39714	ProteinID:KRH39714	ProteinID:KRH39714.1	ProteinID:KRH39715.1
PFAM:PF14604	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF1	InterPro:SH3-like_dom_sf	InterPro:SH3_domain
SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI0002337E8F	:	:

Description

hypothetical protein

Coordinates

chr9:+:43935071..43939676

Molecular Weight (calculated)

40971.4 Da

IEP (calculated)

6.433

GRAVY (calculated)

-0.592

Length

362 amino acids

Sequence
(BLAST)

001: MDAIRKQASK LREQVARQQQ VILRQLGQIS NEPLMIDESE IECHQQLQKL YTSTKTAKHF QRHIVRAIEG FVSVCSKQME IVRRMARDCC KYGTENLGSS
101: YLLARASLQF GNTYDTMENE RETLLGILGD QISEPLRAQI TGAPLEDARH LTRRYDKLHQ EVEAQAAEVL RRRSKLRNSS VSAESSARLQ NAETRLKELK
201: SALAALGREA TSAMLSVEEQ QQQMTLQSLR TMVDAERSYH QHVLVILEKL YTEIIEDRQP KEATSFTLPK DGYNQPADEN ANSSGIDYKH NSQTATYFFA
301: KVVHPFDAQA EGELSLSVDD FVVVRQVGPN GWSEGECKGN AGWFPSAYVE RQDMIPASKI TE

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.