Factsheet for TraesCS4D01G212700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G092400.1	Wheat	cytosol	99.22	99.22
TraesCS4B01G211900.1	Wheat	cytosol	95.34	96.59
HORVU4Hr1G060770.2	Barley	cytosol	85.23	78.52
Os03t0266700-01	Rice	plasma membrane	79.53	77.92
OQU92866	Sorghum	cytosol	76.42	77.63
Zm00001d028558_P003	Maize	cytosol	67.88	66.33
VIT_02s0087g00190.t01	Wine grape	cytosol	54.4	56.6
Solyc08g074780.2.1	Tomato	cytosol	50.52	53.87
PGSC0003DMT400077295	Potato	cytosol	50.26	53.59
KRH39714	Soybean	cytosol	49.22	52.49
KRH76411	Soybean	cytosol	49.22	52.49
GSMUA_Achr6P01240_001	Banana	cytosol	60.36	49.16
TraesCS1D01G176200.1	Wheat	cytosol	45.34	47.43
TraesCS2D01G386200.1	Wheat	cytosol	44.04	45.95
AT1G31440.1	Thale cress	cytosol	48.45	42.6
CDY27149	Canola	cytosol	47.67	42.49
CDY12418	Canola	cytosol	47.67	42.49
Bra038424.1-P	Field mustard	cytosol	47.67	42.49
TraesCS2D01G231700.1	Wheat	cytosol	37.05	41.45
CDY12310	Canola	nucleus	13.21	22.87

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	InterPro:AH/BAR_dom_sf	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267	PFAM:PF14604	PFscan:PS50002
PANTHER:PTHR44109	PANTHER:PTHR44109:SF1	InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657
SUPFAM:SSF50044	EnsemblPlantsGene:TraesCS4D01G212700	EnsemblPlants:TraesCS4D01G212700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:-:365836408..365841770

Molecular Weight (calculated)

43191.8 Da

IEP (calculated)

6.205

GRAVY (calculated)

-0.677

Length

386 amino acids

Sequence
(BLAST)

001: MEALKKQASK LREHVAKQQQ AVRKTFSARH NQDTSLVDEA ELECHQNLQK LYNTTRAAKH FQRTIVRGLE GFVAVSTKQM EIVKKLAEDC CKYGNNNQNL
101: GFVLGKASVE FGKSHSQMEI EREKLLRVLG EQVFEPLREM IMSAPLEDAR LLTYRYQRIR QDMESQIADV VRRQLKSKES SGNTDSVKLQ HAESKLSELR
201: TTLAALGKEA TAAMEAVEAQ QQQITFDRLL AMVDAERTYH QNVADILNKL HDEMLNARPH EESDNNDDVP SSDPSSEPKV SSPKVSPTHV HSNSISEDPA
301: LTETSEPTRN GQEVHYVGEV IHPFDGQADG ELSISVGDFV VVRQVSPNGW SEGECKGKAG WFPSAYVEQR DKAPASKVIE PGRLTA

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.