Factsheet for Bra010715.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90304	Canola	cytosol	99.73	88.15
Zm00001d024355_P001	Maize	cytosol	11.53	82.69
KRH51472	Soybean	cytosol	75.6	76.01
KRH29359	Soybean	endoplasmic reticulum	75.34	75.74
KRH24385	Soybean	endoplasmic reticulum	75.07	75.47
VIT_03s0038g00460.t01	Wine grape	cytosol	73.46	73.85
Solyc01g110300.2.1	Tomato	nucleus	69.97	70.92
PGSC0003DMT400008049	Potato	mitochondrion	70.24	70.81
Bra011550.1-P	Field mustard	mitochondrion	69.97	70.73
GSMUA_Achr11P...	Banana	cytosol	69.71	70.08
Bra034642.1-P	Field mustard	cytosol	65.15	69.03
GSMUA_Achr5P19940_001	Banana	cytosol	67.29	67.66
KRH60785	Soybean	endoplasmic reticulum	70.24	67.53
GSMUA_Achr8P11720_001	Banana	cytosol	67.02	67.39
GSMUA_Achr11P...	Banana	cytosol	67.02	67.02
EER91379	Sorghum	cytosol	65.95	66.67
TraesCS1A01G177700.1	Wheat	cytosol	65.42	66.12
Os10t0512700-01	Rice	plasma membrane	65.42	65.95
Zm00001d013860_P012	Maize	cytosol	66.22	65.87
TraesCS1B01G202500.1	Wheat	cytosol	65.15	65.85
TraesCS1D01G176200.1	Wheat	cytosol	64.88	65.58
TraesCS2B01G406500.2	Wheat	cytosol	63.54	64.05
TraesCS2A01G388400.1	Wheat	cytosol	63.27	63.78
TraesCS2D01G386200.1	Wheat	cytosol	63.27	63.78
OQU82036	Sorghum	cytosol	62.47	63.32
Zm00001d002810_P001	Maize	plasma membrane	62.47	63.32
Zm00001d032465_P002	Maize	cytosol	65.68	62.66
Os04t0539800-01	Rice	plasma membrane	60.59	61.25
Zm00001d025955_P001	Maize	cytosol, mitochondrion	61.13	60.16
HORVU1Hr1G047180.11	Barley	cytosol	59.79	59.95
HORVU2Hr1G092430.1	Barley	cytosol	62.73	56.52
Bra012620.1-P	Field mustard	mitochondrion	48.26	51.28
Bra038424.1-P	Field mustard	cytosol	45.31	39.03

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:22.5.4.1.4	InterPro:AH/BAR_dom_sf	EnsemblPlantsGene:Bra010715	EnsemblPlants:Bra010715.1
EnsemblPlants:Bra010715.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452
InterPro:IPR027267	UniProt:M4D2L2	PFAM:PF14604	PRINTS:PR00499	PFscan:PS50002	PANTHER:PTHR44109
PANTHER:PTHR44109:SF4	InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044
UniParc:UPI0002546B42	SEG:seg	:	:	:	:

Description

AT4G34660 (E=7e-141) | SH3 domain-containing protein 2 (SH3P2)

Coordinates

chrA08:-:16091073..16093098

Molecular Weight (calculated)

42002.6 Da

IEP (calculated)

5.559

GRAVY (calculated)

-0.627

Length

373 amino acids

Sequence
(BLAST)

001: MEAIRKQASK FREQVARQQQ AVLRQFGGGG YGGSDNVITD EEELHRHQKL EKLYISTRSA KHFQRDIVRG VEGSIVTGSK QVEIGTKLCE DSRRYGSGNT
101: CTSGNTLTRA SLSFANARDQ MEKERGNLLK ALGTQVAEPL RAMVIGAPLV DARHLAQRYE RMRQETESQT IEVSKRQAKV RENPGNPELV MKLEYAEAKL
201: QDLKSNMTIL GKEAASAMAA VEEQQQTQTF QRLITLVEAE RIYHQRILEI IERLEGEMRV EQQRIEGPQT PQVDNITSSP PPSYEEASNE VNASHMHDGT
301: SDAMGYFLGE VMFSYQSDSE FELSLSVGDY VVIREVTSSG WAEGECKGKA GWFPYDYIER RDRVLATKVI EVI

Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.