Factsheet for Zm00001d025955_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002810_P001
Zm00001d009530_P001
Zm00001d011984_P001
Zm00001d013860_P012
Zm00001d024355_P001
Zm00001d025955_P001
Zm00001d028417_P001
Zm00001d032465_P002
Zm00001d038979_P001
Zm00001d042303_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34660.1	Zm00001d028417_P001	AT2G31260.1	24249832
AT4G34660.1	Zm00001d011984_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d042303_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d002810_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d013860_P012	AT4G34660.1	24249832
AT4G34660.1	Zm00001d024355_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d025955_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d032465_P002	AT4G34660.1	24249832
AT4G34660.1	Zm00001d009530_P001	AT5G11550.1	21798944
AT4G34660.1	Zm00001d038979_P001	AT5G11550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82036	Sorghum	cytosol	90.24	92.93
Zm00001d002810_P001	Maize	plasma membrane	88.39	91.03
TraesCS2A01G388400.1	Wheat	cytosol	82.85	84.86
TraesCS2D01G386200.1	Wheat	cytosol	82.59	84.59
TraesCS2B01G406500.2	Wheat	cytosol	82.59	84.59
Os04t0539800-01	Rice	plasma membrane	81.53	83.74
HORVU2Hr1G092430.1	Barley	cytosol	81.79	74.88
Zm00001d024355_P001	Maize	cytosol	9.76	71.15
GSMUA_Achr11P...	Banana	cytosol	67.28	68.73
GSMUA_Achr5P19940_001	Banana	cytosol	67.28	68.73
KRH51472	Soybean	cytosol	67.02	68.46
KRH29359	Soybean	endoplasmic reticulum	66.49	67.92
VIT_03s0038g00460.t01	Wine grape	cytosol	66.23	67.66
Zm00001d013860_P012	Maize	cytosol	66.49	67.2
Solyc01g110300.2.1	Tomato	nucleus	65.17	67.12
VIT_18s0001g13530.t01	Wine grape	cytosol	65.17	67.12
GSMUA_Achr8P11720_001	Banana	cytosol	65.44	66.85
PGSC0003DMT400008049	Potato	mitochondrion	65.17	66.76
KRH24385	Soybean	endoplasmic reticulum	65.17	66.58
AT4G34660.1	Thale cress	mitochondrion	64.12	66.03
CDX75452	Canola	mitochondrion	63.85	65.58
CDX69077	Canola	mitochondrion	63.85	65.58
Bra011550.1-P	Field mustard	mitochondrion	63.85	65.58
Zm00001d032465_P002	Maize	cytosol	67.02	64.96
CDY17473	Canola	mitochondrion	62.8	64.67
CDX76295	Canola	cytosol	62.53	64.58
Bra034642.1-P	Field mustard	cytosol	59.89	64.49
Solyc07g032110.2.1	Tomato	cytosol	60.69	62.16
KRH60785	Soybean	endoplasmic reticulum	63.59	62.11
PGSC0003DMT400035686	Potato	cytosol	60.16	61.62
Bra010715.1-P	Field mustard	cytosol	60.16	61.13
Zm00001d042379_P001	Maize	peroxisome	16.89	56.64
CDY12115	Canola	cytosol	60.42	54.14
CDX90304	Canola	cytosol	60.16	54.03
CDY12114	Canola	cytosol	16.89	53.78
Zm00001d006461_P001	Maize	mitochondrion	42.74	46.55
Zm00001d006152_P001	Maize	nucleus	17.94	45.95
Zm00001d008747_P001	Maize	nucleus	20.32	45.56
Zm00001d028558_P003	Maize	cytosol	39.05	37.47
Zm00001d022555_P001	Maize	cytosol, mitochondrion	30.87	28.68
Zm00001d022556_P001	Maize	cytosol	27.44	27.88

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:22.5.4.1.4	InterPro:AH/BAR_dom_sf	ProteinID:AQK45155.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267	UniProt:K7UKL4
PFAM:PF00018	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF2	InterPro:SH3-like_dom_sf	InterPro:SH3_domain
SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI000220F70A	EnsemblPlantsGene:Zm00001d025955	EnsemblPlants:Zm00001d025955_P001
EnsemblPlants:Zm00001d025955_T001	SEG:seg	:	:	:	:

Description

SH3 domain-containing protein 2

Coordinates

chr10:-:134652242..134657270

Molecular Weight (calculated)

42122.5 Da

IEP (calculated)

6.201

GRAVY (calculated)

-0.570

Length

379 amino acids

Sequence
(BLAST)

001: MEALWKQASR LKDQVARQGV FKQFGYGNSD NAFTDESEVK MHQRLEKLYL STRAAKHFQR DIVRGMEGYI VTGSKQVEIG NKLSDDSQKY GAENTCTSGD
101: TLSKAATYFG KARSQMEKER GNMLNAFGTQ VYVPNAGFAS PCGRATAGNG NGCAPLEDAR HLAQRYDRTR QEAEAQAVEV SRRQNRVRES AGNGDMISKL
201: EAAEYKLEEL KSNMVALGKE AISAMSAVET QQQWLTLQRL IALVEAERGY HQRVLEILDQ LEKEMVSERQ KIEAPLTPAA DNYMPPPPPS YDEVNGAFAS
301: TSVNESVQSV NFFLGEALDS FKAESEFELT LSAGDIVIVR KISSNGWAEG ECKGKAGWFP HAYIERREHV LASKVPHIF

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.