Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011550.1-P | Field mustard | mitochondrion | 94.29 | 94.04 |
| CDX75452 | Canola | mitochondrion | 94.29 | 94.04 |
| CDX69077 | Canola | mitochondrion | 94.02 | 93.77 |
| CDX76295 | Canola | cytosol | 91.3 | 91.55 |
| CDY17473 | Canola | mitochondrion | 91.03 | 91.03 |
| Bra034642.1-P | Field mustard | cytosol | 86.68 | 90.62 |
| Zm00001d024355_P001 | Maize | cytosol | 12.5 | 88.46 |
| KRH51472 | Soybean | cytosol | 80.43 | 79.78 |
| KRH29359 | Soybean | endoplasmic reticulum | 79.89 | 79.25 |
| KRH24385 | Soybean | endoplasmic reticulum | 79.62 | 78.98 |
| Solyc01g110300.2.1 | Tomato | nucleus | 76.63 | 76.63 |
| VIT_03s0038g00460.t01 | Wine grape | cytosol | 76.9 | 76.28 |
| PGSC0003DMT400008049 | Potato | mitochondrion | 76.63 | 76.22 |
| GSMUA_Achr11P... | Banana | cytosol | 73.64 | 73.05 |
| GSMUA_Achr5P19940_001 | Banana | cytosol | 73.64 | 73.05 |
| KRH60785 | Soybean | endoplasmic reticulum | 75.82 | 71.91 |
| GSMUA_Achr8P11720_001 | Banana | cytosol | 72.28 | 71.7 |
| EER91379 | Sorghum | cytosol | 69.84 | 69.65 |
| Os10t0512700-01 | Rice | plasma membrane | 69.84 | 69.46 |
| TraesCS1A01G177700.1 | Wheat | cytosol | 69.02 | 68.83 |
| TraesCS1B01G202500.1 | Wheat | cytosol | 68.75 | 68.56 |
| Zm00001d013860_P012 | Maize | cytosol | 69.84 | 68.53 |
| Os04t0539800-01 | Rice | plasma membrane | 68.48 | 68.29 |
| TraesCS1D01G176200.1 | Wheat | cytosol | 68.48 | 68.29 |
| TraesCS2B01G406500.2 | Wheat | cytosol | 68.48 | 68.11 |
| TraesCS2A01G388400.1 | Wheat | cytosol | 68.21 | 67.84 |
| TraesCS2D01G386200.1 | Wheat | cytosol | 68.21 | 67.84 |
| OQU82036 | Sorghum | cytosol | 67.66 | 67.66 |
| GSMUA_Achr11P... | Banana | cytosol | 67.66 | 66.76 |
| Zm00001d002810_P001 | Maize | plasma membrane | 66.58 | 66.58 |
| Zm00001d032465_P002 | Maize | cytosol | 70.11 | 65.98 |
| Zm00001d025955_P001 | Maize | cytosol, mitochondrion | 66.03 | 64.12 |
| HORVU1Hr1G047180.11 | Barley | cytosol | 63.32 | 62.63 |
| HORVU2Hr1G092430.1 | Barley | cytosol | 67.66 | 60.14 |
| AT4G18060.1 | Thale cress | cytosol, mitochondrion | 50.54 | 52.99 |
| AT4G39020.1 | Thale cress | cytosol | 18.48 | 40.24 |
| AT1G31440.1 | Thale cress | cytosol | 46.74 | 39.18 |
Protein Annotations
| Gene3D:1.20.1270.60 | Gene3D:2.30.30.40 | MapMan:22.5.4.1.4 | EntrezGene:829618 | UniProt:A0A178V6Q6 | ProteinID:AEE86405.1 |
| ProteinID:AEE86406.1 | ProteinID:AEE86407.1 | EMBL:AF367774 | InterPro:AH/BAR_dom_sf | ArrayExpress:AT4G34660 | EnsemblPlantsGene:AT4G34660 |
| RefSeq:AT4G34660 | TAIR:AT4G34660 | RefSeq:AT4G34660-TAIR-G | EnsemblPlants:AT4G34660.1 | TAIR:AT4G34660.1 | EMBL:AY072132 |
| EMBL:AY087158 | EMBL:AY096478 | Unigene:At.2311 | ProteinID:CAA18845.1 | ProteinID:CAB80183.1 | ncoils:Coil |
| GO:GO:0000421 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005770 | GO:GO:0005773 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009504 |
| GO:GO:0009920 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030136 | GO:GO:0031410 |
| GO:GO:0072583 | InterPro:IPR001452 | InterPro:IPR027267 | RefSeq:NP_001190913.1 | RefSeq:NP_001190914.1 | RefSeq:NP_567969.1 |
| ProteinID:OAP00643.1 | PFAM:PF14604 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50002 | PANTHER:PTHR44109 |
| PANTHER:PTHR44109:SF4 | UniProt:Q8VWF1 | InterPro:SH3-like_dom_sf | InterPro:SH3_domain | SMART:SM00326 | SUPFAM:SSF103657 |
| SUPFAM:SSF50044 | UniParc:UPI00000A4C38 | SEG:seg | : | : | : |
Description
SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
Coordinates
chr4:-:16545190..16548494
Molecular Weight (calculated)
40927.5 Da
IEP (calculated)
6.896
GRAVY (calculated)
-0.609
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.