CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91379
EES01994
EES19935
KXG33125
KXG38175
OQU82036
OQU92911

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34660.1	KXG38175	AT2G31260.1	24249832
AT4G34660.1	OQU92911	AT2G31260.1	24249832
AT4G34660.1	EES01994	AT3G61710.1	24249832
AT4G34660.1	KXG33125	AT3G61710.1	24249832
AT4G34660.1	EER91379	AT4G34660.1	24249832
AT4G34660.1	OQU82036	AT4G34660.1	24249832
AT4G34660.1	EES19935	AT5G11550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002810_P001	Maize	plasma membrane	95.38	95.38
Zm00001d025955_P001	Maize	cytosol, mitochondrion	92.93	90.24
TraesCS2A01G388400.1	Wheat	cytosol	88.86	88.38
TraesCS2D01G386200.1	Wheat	cytosol	88.59	88.11
TraesCS2B01G406500.2	Wheat	cytosol	88.59	88.11
Os04t0539800-01	Rice	plasma membrane	87.77	87.53
HORVU2Hr1G092430.1	Barley	cytosol	87.77	78.02
GSMUA_Achr5P19940_001	Banana	cytosol	72.28	71.7
GSMUA_Achr11P...	Banana	cytosol	72.28	71.7
EER91379	Sorghum	cytosol	71.74	71.54
VIT_03s0038g00460.t01	Wine grape	cytosol	71.74	71.16
KRH51472	Soybean	cytosol	71.47	70.89
VIT_18s0001g13530.t01	Wine grape	cytosol	69.84	69.84
KRH29359	Soybean	endoplasmic reticulum	70.38	69.81
Solyc01g110300.2.1	Tomato	nucleus	69.57	69.57
GSMUA_Achr8P11720_001	Banana	cytosol	70.11	69.54
PGSC0003DMT400008049	Potato	mitochondrion	69.57	69.19
KRH24385	Soybean	endoplasmic reticulum	69.29	68.73
AT4G34660.1	Thale cress	mitochondrion	67.66	67.66
CDX75452	Canola	mitochondrion	67.39	67.21
CDX69077	Canola	mitochondrion	67.39	67.21
Bra011550.1-P	Field mustard	mitochondrion	67.39	67.21
CDY17473	Canola	mitochondrion	66.03	66.03
CDX76295	Canola	cytosol	65.76	65.94
Bra034642.1-P	Field mustard	cytosol	63.04	65.91
KRH60785	Soybean	endoplasmic reticulum	67.93	64.43
Solyc07g032110.2.1	Tomato	cytosol	64.4	64.05
PGSC0003DMT400035686	Potato	cytosol	63.59	63.24
Bra010715.1-P	Field mustard	cytosol	63.32	62.47
CDY12114	Canola	cytosol	19.02	58.82
CDY12115	Canola	cytosol	63.59	55.32
CDX90304	Canola	cytosol	63.32	55.21
EER99434	Sorghum	cytosol	46.47	49.14
OQU92866	Sorghum	cytosol	45.65	44.21

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:22.5.4.1.4	UniProt:A0A1Z5RF72	InterPro:AH/BAR_dom_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267	EnsemblPlants:OQU82036
ProteinID:OQU82036	ProteinID:OQU82036.1	PFAM:PF00018	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF2
InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	EnsemblPlantsGene:SORBI_3006G163000	SUPFAM:SSF103657	SUPFAM:SSF50044
UniParc:UPI0001FCC90A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:52056253..52060555

Molecular Weight (calculated)

41231.8 Da

IEP (calculated)

6.040

GRAVY (calculated)

-0.556

Length

368 amino acids

Sequence
(BLAST)

001: MEALWKQASR LKDQVARQGV FKQFGYGNSD NAFTDESEVK LHQRLEKLYL STRAAKHFQR DIVRGVEGYI VTGSKQVEIG NKLSDDSQKY GVENTCTSGD
101: TLSKAATYFG KARSQMEKER GNMLKAFGTQ VAEPLRAMVM GAPLEDARHL AQRYDRMRQE AEAQVVEVSR RQNRVRESAG NGDMISKLEA AEYKLEELKS
201: NMVGLGREAI AAMSAVETQQ QRLTLQRLIA LVEAERAYHK RVLEILDQLE QEMVSERQKI EAPPTPAAEN YMPPPPPPSY DEVNGAFAST SVNESVQSVD
301: FFLGEALDSF KAESEFELTL SAGDIVIVRK ISSNGWAEGE CKGKAGWFPH AYIERQERVL ASKVPHIF

Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.