CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042303_P001	Maize	cytosol	95.6	95.79
TraesCS3D01G266800.1	Wheat	nucleus	87.2	86.51
TraesCS3A01G266600.1	Wheat	golgi	86.2	85.69
TraesCS3B01G300100.2	Wheat	golgi	85.6	83.11
Os01t0681400-01	Rice	cytosol	82.8	82.8
Os03t0644000-01	Rice	cytosol	82.0	81.84
Zm00001d011984_P001	Maize	mitochondrion, plastid	90.0	77.72
Os03t0258500-01	Rice	cytosol	79.4	73.11
KXG33125	Sorghum	cytosol	59.4	66.15
GSMUA_Achr7P24520_001	Banana	cytosol	66.0	63.34
VIT_15s0046g00950.t01	Wine grape	nucleus	65.2	62.45
PGSC0003DMT400046335	Potato	cytosol	65.0	62.26
Solyc05g050390.2.1	Tomato	cytosol	65.0	62.14
KRH30023	Soybean	cytosol	61.8	60.71
KRH62897	Soybean	cytosol	61.2	60.12
HORVU3Hr1G062970.2	Barley	plastid	62.6	59.06
AT3G61710.1	Thale cress	cytosol	58.6	56.67
CDX67858	Canola	nucleus	58.8	56.43
CDY25070	Canola	plastid	42.6	55.61
CDY25058	Canola	nucleus	58.2	55.53
CDY70494	Canola	cytosol, golgi, plastid	56.2	53.22
GSMUA_Achr7P24530_001	Banana	cytosol	58.0	52.25
Bra003466.1-P	Field mustard	nucleus	50.4	33.69

Protein Annotations

Gene3D:1.10.418.40	MapMan:22.5.1.2	EntrezGene:8079821	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	UniProt:C5XGD8
ncoils:Coil	EnsemblPlants:EES01994	ProteinID:EES01994	ProteinID:EES01994.1	GO:GO:0000045	GO:GO:0000407
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006914
GO:GO:0006950	GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016043	GO:GO:0031410
GO:GO:0034271	GO:GO:0034272	GO:GO:0044804	GO:GO:0045324	InterPro:IPR038274	PFAM:PF04111
PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	EnsemblPlantsGene:SORBI_3003G408500	unigene:Sbi.13358	UniParc:UPI0001A84AAF	RefSeq:XP_002456874.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:71627429..71632611

Molecular Weight (calculated)

56166.3 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.480

Length

500 amino acids

Sequence
(BLAST)

001: MKPPAGSSGK GGAVDPSLPR FRCQECRRAL VVVGVDSYAD RLPAHAAPGN HASSVQGSVM GASKMDNSYV VLSRQNKSQG PRIPPRPPSA AAVHTDPIQS
101: TRAIEGSYIV LPPPAASIYK TPASEGGGAQ LTAPGVNSSS PSQGNNSGFH SSVTVLKRAF EIASSQTQVE QPLCLECMRV LSDKMDKEIE DVNADIKSYE
201: ACLQRLEQEP YNILSETDFQ KEKQKIEEEE NKLKAAIEEA EKQYSEVSSE MKDLEIKSKQ FEELEERYWH EFNSFQFQLA SHQEERDAVF AKIEVSQVHL
301: ELLKRTNVLN DAFYISHDGV IGTINNFRLG RLSNVEVEWD EINAAWGQAA LLLHTMAQYF TPKFQYRIKI HPMGSYPRVT DIHNNTYELF GPVNLFWSTR
401: FDKAMTWFLT CLQEFAEFAI SLDKENNVPP EKSLKLPYKI DGDKVGSHTI VLSFNKNENW TKALKYMLCN LKWVLYWFIG NTSFAPHSGS LHTQSLKNKS

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.