Factsheet for TraesCS3D01G266800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G266600.1	Wheat	golgi	98.02	98.21
TraesCS3B01G300100.2	Wheat	golgi	97.02	94.95
EES01994	Sorghum	cytosol	86.51	87.2
Zm00001d042303_P001	Maize	cytosol	86.31	87.17
Os03t0644000-01	Rice	cytosol	85.32	85.83
Os01t0681400-01	Rice	cytosol	84.52	85.2
Os03t0258500-01	Rice	cytosol	80.16	74.4
Zm00001d011984_P001	Maize	mitochondrion, plastid	81.55	70.98
KXG33125	Sorghum	cytosol	61.11	68.6
HORVU3Hr1G062970.2	Barley	plastid	71.43	67.92
PGSC0003DMT400046335	Potato	cytosol	66.27	63.98
Solyc05g050390.2.1	Tomato	cytosol	65.28	62.91
GSMUA_Achr7P24520_001	Banana	cytosol	64.88	62.76
VIT_15s0046g00950.t01	Wine grape	nucleus	64.88	62.64
KRH30023	Soybean	cytosol	61.31	60.71
KRH62897	Soybean	cytosol	60.52	59.92
AT3G61710.1	Thale cress	cytosol	57.74	56.29
CDX67858	Canola	nucleus	57.34	55.47
CDY25070	Canola	plastid	42.06	55.35
CDY25058	Canola	nucleus	56.75	54.58
CDY70494	Canola	cytosol, golgi, plastid	55.56	53.03
GSMUA_Achr7P24530_001	Banana	cytosol	57.14	51.89
Bra003466.1-P	Field mustard	nucleus	49.8	33.56

Protein Annotations

EnsemblPlants:TraesCS3D01G266800.1	EnsemblPlantsGene:TraesCS3D01G266800	Gene3D:1.10.418.40	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	InterPro:IPR038274	ncoils:Coil
PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	PFAM:PF04111	SEG:seg	MapMan:22.5.1.2	:

Description

No Description!

Coordinates

chr3D:+:370113306..370120010

Molecular Weight (calculated)

56763.2 Da

IEP (calculated)

6.652

GRAVY (calculated)

-0.463

Length

504 amino acids

Sequence
(BLAST)

001: MKPKVAAAAA GGEKGRGVDP SLPRFKCQEC HRALVVVGVE SFPDRLPAHA NSGIHASSVQ GSIMGASRMD SSYVVLSKQN RSQGPRIPPR PPSAAARHVE
101: PNQSTRAIEG SYIMLPPAAA SIYKTSTSEG GGAHLSPPNV NSTSPSPGNN SGFHSSVTVL KRAFEIASSQ TQVEQPLCLE CMRVLSDKMD KEIEDVNTDI
201: KAYDACLQRL EQESYNILSE TDFLKEKEKI EEEEKKLKAA IEEAEKQYSE VSSEMKDLET KSKQFEELEE RYWHEFNSFQ FQLTSHQEER DAVLAKIEVS
301: QVHLELLKRT NVLNDAFYIS HDGVIGTINN FRLGRLPNVQ VEWDEINAAW GQAALLLHTM AQYFPKFQYR IKIHPMGSYP RVTDINNNTY ELFGPVNLFW
401: STRFDKAMTW FLTCLQEFSE FAISLDKENN VPSDKSLKLP YKIDGDKVGS YTIFLSFNKL ENWTKALKYM LCNLKWVLYW FIGNTSFAPP SASLYLAQSP
501: NKKG

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.