Factsheet for Zm00001d042303_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01994	Sorghum	cytosol	95.79	95.6
TraesCS3D01G266800.1	Wheat	nucleus	87.17	86.31
TraesCS3A01G266600.1	Wheat	golgi	86.17	85.49
TraesCS3B01G300100.2	Wheat	golgi	85.77	83.11
Os03t0644000-01	Rice	cytosol	82.57	82.24
Os01t0681400-01	Rice	cytosol	81.96	81.8
Zm00001d011984_P001	Maize	mitochondrion, plastid	89.58	77.2
Os03t0258500-01	Rice	cytosol	78.56	72.19
GSMUA_Achr7P24520_001	Banana	cytosol	64.93	62.19
VIT_15s0046g00950.t01	Wine grape	nucleus	64.33	61.49
PGSC0003DMT400046335	Potato	cytosol	63.93	61.11
Solyc05g050390.2.1	Tomato	cytosol	63.73	60.8
KRH30023	Soybean	cytosol	61.32	60.12
KRH62897	Soybean	cytosol	60.72	59.53
HORVU3Hr1G062970.2	Barley	plastid	62.73	59.06
CDY25070	Canola	plastid	42.89	55.87
CDX67858	Canola	nucleus	58.32	55.85
AT3G61710.1	Thale cress	cytosol	57.72	55.71
CDY25058	Canola	nucleus	57.72	54.96
CDY70494	Canola	cytosol, golgi, plastid	56.11	53.03
GSMUA_Achr7P24530_001	Banana	cytosol	58.12	52.25
Bra003466.1-P	Field mustard	nucleus	50.3	33.56

Protein Annotations

Gene3D:1.10.418.40	MapMan:22.5.1.2	EntrezGene:732797	EMBL:AM075828	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf
ncoils:Coil	EMBL:EU957714	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	InterPro:IPR038274	ProteinID:ONM34982.1	PFAM:PF04111	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4
UniProt:Q4A190	UniParc:UPI000059049C	EnsemblPlantsGene:Zm00001d042303	EnsemblPlants:Zm00001d042303_P001	EnsemblPlants:Zm00001d042303_T001	SEG:seg

Description

autophagy6aBeclin 1 protein%3B Beclin-1-like protein

Coordinates

chr3:-:160015501..160021474

Molecular Weight (calculated)

56130.4 Da

IEP (calculated)

6.651

GRAVY (calculated)

-0.455

Length

499 amino acids

Sequence
(BLAST)

001: MKPPAGASGK GGAVDPSLPR FRCQECRRAL VVVGVESYAD RLPAHAAPGN HASSVQGSVM GASKMDNSYV VLSRQNKSQG PRIPPRPPSA AAAHADPSQS
101: TRAIEGSYIV LPPPAASIYR TSASEGGAQL TPSGVISSSP SLGNNSGFHS SVTVLKRAFE IASSQTQVEQ PLCLECMRVL SDKMDKEIED VNADIKAYEA
201: CLQRLEQEPY NILSETDFQK EKQKIEEEEK KLKAAIEEAE KQYSEVRSEM ENLEIKSKQF EELEERYWHE FNSFQFQLTS HQEERDAVFA KIEVSQVHLE
301: LLKRTNVLND AFYISHDGVI GTINNFRLGR LSNVEVEWDE INAAWGQAAL LLHTMAQYFT PKFQYRIKIH PMGSYPRVTD IQNNTYELFG PVNLFWSTRF
401: DKAMTWFLTC LQEFAEFAIS LDKQNNVPPE KSLKLPYKID GDKVGSHTIV LSFNKNENWT KALKYMLCNL KWVLYWFIGN TSFAPPSVSL HTQSLKNKS

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.