CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30023	Soybean	cytosol	96.27	96.27
VIT_15s0046g00950.t01	Wine grape	nucleus	83.3	81.23
Solyc05g050390.2.1	Tomato	cytosol	75.44	73.42
PGSC0003DMT400046335	Potato	cytosol	75.05	73.18
AT3G61710.1	Thale cress	cytosol	73.08	71.95
CDX67858	Canola	nucleus	72.89	71.21
CDY25058	Canola	nucleus	73.28	71.18
CDY70494	Canola	cytosol, golgi, plastid	70.53	67.99
GSMUA_Achr7P24520_001	Banana	cytosol	68.96	67.37
CDY25070	Canola	plastid	49.31	65.54
Os01t0681400-01	Rice	cytosol	60.31	61.4
EES01994	Sorghum	cytosol	60.12	61.2
TraesCS3A01G266600.1	Wheat	golgi	60.31	61.03
Zm00001d042303_P001	Maize	cytosol	59.53	60.72
TraesCS3D01G266800.1	Wheat	nucleus	59.92	60.52
Os03t0644000-01	Rice	cytosol	58.94	59.88
TraesCS3B01G300100.2	Wheat	golgi	59.73	59.03
GSMUA_Achr7P24530_001	Banana	cytosol	60.31	55.32
Os03t0258500-01	Rice	cytosol	56.97	53.41
KXG33125	Sorghum	cytosol	43.61	49.44
Zm00001d011984_P001	Maize	mitochondrion, plastid	55.99	49.22
Bra003466.1-P	Field mustard	nucleus	62.08	42.25
HORVU3Hr1G062970.2	Barley	plastid	42.44	40.75

Protein Annotations

Gene3D:1.10.418.40	EntrezGene:100812721	MapMan:22.5.1.2	EMBL:ACUP02002413	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf
ncoils:Coil	EnsemblPlantsGene:GLYMA_04G141000	GO:GO:0000045	GO:GO:0000407	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006914	GO:GO:0006950	GO:GO:0006995
GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009987
GO:GO:0009991	GO:GO:0016020	GO:GO:0016043	GO:GO:0031410	GO:GO:0034271	GO:GO:0034272
GO:GO:0044804	GO:GO:0045324	UniProt:I1JWG4	InterPro:IPR038274	EnsemblPlants:KRH62897	ProteinID:KRH62897
ProteinID:KRH62897.1	PFAM:PF04111	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	UniParc:UPI000233A1F6	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:23665626..23682229

Molecular Weight (calculated)

57918.3 Da

IEP (calculated)

6.212

GRAVY (calculated)

-0.583

Length

509 amino acids

Sequence
(BLAST)

001: MKKGENKGRT RTFPVDPNVP RWVCQNCRNP LCIVGADSYA DKFFNDPSRY GMQGSSIHVA SSVLSTTKMD NSYVVLPKQK PQAQGNPPRP RGDAAAQPGK
101: AMEESFVVVY KSESGTDGNA VHSSGTGADS GGHLPPHNSG FNSTITVLTR AFEIATTQMQ VEQPSCLDCM RILSDKLDKE VEDVNRDIEA YEACLKCLEG
201: EARDVLSEAD FLKEKLKIEE EERRLEAAIE ATERQNAEVN AELRELELKS SRFKELEERY WHEFNNFQFQ LISHQEERDA ILAKIEVSQA HLELLKRTNV
301: LNDAFPISHD GEFGTINNFR LGRLPKIPVE WDEINAAWGQ ACLLLHTMCQ YFRPKFQYRI KIIPMGSYPR ITDTNNSTYE LFGPVNLFWS TRYDKAMTLF
401: LACLKDFADF AKSKDQENNI PPEKCFKLPY KIENDKVENY SITQSFNKQE NWTKSLKYTL CNLKWALYWF VGNTNFQPLS AMVSSHAEVP AVGSLYTKRG
501: VDAKSESRN

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.