Factsheet for Os01t0681400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0258500-01	Rice	cytosol	92.2	84.9
TraesCS3A01G266600.1	Wheat	golgi	85.2	84.69
TraesCS3D01G266800.1	Wheat	nucleus	85.2	84.52
Os03t0644000-01	Rice	cytosol	84.6	84.43
EES01994	Sorghum	cytosol	82.8	82.8
Zm00001d042303_P001	Maize	cytosol	81.8	81.96
TraesCS3B01G300100.2	Wheat	golgi	84.2	81.75
Zm00001d011984_P001	Maize	mitochondrion, plastid	78.0	67.36
KXG33125	Sorghum	cytosol	58.8	65.48
GSMUA_Achr7P24520_001	Banana	cytosol	65.4	62.76
VIT_15s0046g00950.t01	Wine grape	nucleus	64.4	61.69
PGSC0003DMT400046335	Potato	cytosol	64.2	61.49
Solyc05g050390.2.1	Tomato	cytosol	63.4	60.61
KRH30023	Soybean	cytosol	61.6	60.51
KRH62897	Soybean	cytosol	61.4	60.31
HORVU3Hr1G062970.2	Barley	plastid	61.2	57.74
AT3G61710.1	Thale cress	cytosol	57.0	55.13
CDX67858	Canola	nucleus	57.2	54.89
CDY25058	Canola	nucleus	57.2	54.58
CDY25070	Canola	plastid	41.0	53.52
CDY70494	Canola	cytosol, golgi, plastid	56.0	53.03
GSMUA_Achr7P24530_001	Banana	cytosol	58.8	52.97
Bra003466.1-P	Field mustard	nucleus	50.0	33.42

Protein Annotations

Gene3D:1.10.418.40	MapMan:22.5.1.2	EntrezGene:4324394	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	ProteinID:BAF05794.1
ProteinID:BAS73712.1	ncoils:Coil	ProteinID:EEE55184.1	GO:GO:0000045	GO:GO:0000407	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006914	GO:GO:0006950
GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016043	GO:GO:0031410	GO:GO:0034271
GO:GO:0034272	GO:GO:0044804	GO:GO:0045324	InterPro:IPR038274	EnsemblPlantsGene:Os01g0681400	EnsemblPlants:Os01t0681400-01
PFAM:PF04111	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	UniProt:Q0JKD4	UniParc:UPI0000DD8C79	RefSeq:XP_015622708.1
SEG:seg	:	:	:	:	:

Description

AUTOPHAGY ASSOCIATED GENE 6AATG6/Beclin-1 protein, Abiotic stresses (heat,cold and drought) and hormone (abscisic acid) response (Os01t0681400-01)

Coordinates

chr1:-:28070715..28076428

Molecular Weight (calculated)

55901.3 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.362

Length

500 amino acids

Sequence
(BLAST)

001: MKAPAAAAAA VGNRAGGVDP SIPRFKCQEC HRALVVVGVD SFADKLPAQA TSAHASSVHG SIMGASRMDN SYVVLSKQNK SHGHGIPPRP PSAAAPHIEP
101: NQPTRAMEGS YIVLPPAAAS IYKTSTSEGG GAQLPPPSIN SSSLLPGNSF HSNVTVLKRA FEIATSQTQV EQPMCLDCMR LLSDKMDKEI EDVNADIKAY
201: EVCLQHLEQE SHTVLSDAGF QKEKLKIEEE EKKLNAAIEE AEKQYSEISS EMKDLEIKSK EFEELEERYW HEFNSFQFQL TSHQEERDAI LAKIEVSQVH
301: LELLKQTNVL NDAFYISHDG VIGTINNFRL GRLPNVQVEW DEINAAWGQA ALLLHTMAQY FTPKFEYRIK IHPMGSYPRV TDIHKNTYEL FGPVNLFWST
401: RFDKAMTWFL TCLQDFAEFA ISLDKENNVP PEKSLKLPYK IDGDKVGSHT IFLSFNKVEN WTKALKYTLC NLKWVLYWFI GNTSFAPPSG SLCAAQSSKR

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.