Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P24520_001 | Banana | cytosol | 70.09 | 74.66 |
VIT_15s0046g00950.t01 | Wine grape | nucleus | 59.82 | 63.6 |
KRH30023 | Soybean | cytosol | 56.22 | 61.3 |
PGSC0003DMT400046335 | Potato | cytosol | 56.76 | 60.34 |
KRH62897 | Soybean | cytosol | 55.32 | 60.31 |
Solyc05g050390.2.1 | Tomato | cytosol | 55.68 | 59.08 |
Os01t0681400-01 | Rice | cytosol | 52.97 | 58.8 |
Zm00001d042303_P001 | Maize | cytosol | 52.25 | 58.12 |
EES01994 | Sorghum | cytosol | 52.25 | 58.0 |
TraesCS3A01G266600.1 | Wheat | golgi | 52.25 | 57.65 |
Os03t0644000-01 | Rice | cytosol | 51.89 | 57.48 |
TraesCS3D01G266800.1 | Wheat | nucleus | 51.89 | 57.14 |
AT3G61710.1 | Thale cress | cytosol | 52.79 | 56.67 |
CDX67858 | Canola | nucleus | 52.97 | 56.43 |
TraesCS3B01G300100.2 | Wheat | golgi | 51.89 | 55.92 |
CDY25058 | Canola | nucleus | 52.61 | 55.73 |
CDY70494 | Canola | cytosol, golgi, plastid | 50.81 | 53.41 |
CDY25070 | Canola | plastid | 36.76 | 53.26 |
Os03t0258500-01 | Rice | cytosol | 50.99 | 52.12 |
KXG33125 | Sorghum | cytosol | 38.56 | 47.66 |
Zm00001d011984_P001 | Maize | mitochondrion, plastid | 48.65 | 46.63 |
HORVU3Hr1G062970.2 | Barley | plastid | 36.76 | 38.49 |
Bra003466.1-P | Field mustard | nucleus | 45.23 | 33.56 |
Protein Annotations
EnsemblPlants:GSMUA_Achr7P24530_001 | EnsemblPlants:GSMUA_Achr7T24530_001 | EnsemblPlantsGene:GSMUA_Achr7G24530_001 | Gene3D:1.10.418.40 | GO:GO:0006914 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | InterPro:Atg6/Beclin | InterPro:Atg6/Beclin_C_sf | InterPro:IPR038274 |
ncoils:Coil | PANTHER:PTHR12768 | PANTHER:PTHR12768:SF4 | PFAM:PF04111 | SEG:seg | UniParc:UPI000295098D |
UniProt:M0TKD9 | MapMan:22.5.1.2 | : | : | : | : |
Description
Beclin-1-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G24530_001]
Coordinates
chr7:+:26496753..26508434
Molecular Weight (calculated)
64226.2 Da
IEP (calculated)
5.923
GRAVY (calculated)
-0.475
Length
555 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNIPRWVC QSCRHALHVI NVDSKNDKFF SNPSCSGMEA STVQGSVMGS SQVDHSFVVL PRSTTPQPDS SHSAKVVTES FVVLPPAAAS MYRSESTPEG
101: RGSQEQVQGE SPSSGLQVND PRFNSSKILK RVFNIATSQT QVEQPICLEC IRLLSDKLLE EVEDVNQDIE AYESCLQRFE MESDDVLSEA DFLQEKTKIE
201: EEERRLQVEI EEIEKQRLEA NAELNEIQMK CKEFEELEER YWHEFNSFQF QLISHQEERD ALLAKIEVSQ AHLELLKRIN VLTDAFSISH EGEFGTINNF
301: RLGRLPKMRV EWDEINAAWG QACLLLHTMA QHFRPKFLYR IKILPMGSYP LILDNNNNAY QLYDRINMFG PVNLFWSSRY DKATTLFLTC LKEFAEFANL
401: KDQENNTPPE KCFRLPYKIE NDNVGNYTIT HSFNKQENWT KALKYTLCNL KWVQLWFVAN SSFQPLSAHA DVPHPQQPPL PIARSPFLSR VFSDRRRPLR
501: NPSRILDLES DRSLLRQPGT ICGAHGLLSA SADLRSMWFW IRRFRLQVRW YVMLA
101: RGSQEQVQGE SPSSGLQVND PRFNSSKILK RVFNIATSQT QVEQPICLEC IRLLSDKLLE EVEDVNQDIE AYESCLQRFE MESDDVLSEA DFLQEKTKIE
201: EEERRLQVEI EEIEKQRLEA NAELNEIQMK CKEFEELEER YWHEFNSFQF QLISHQEERD ALLAKIEVSQ AHLELLKRIN VLTDAFSISH EGEFGTINNF
301: RLGRLPKMRV EWDEINAAWG QACLLLHTMA QHFRPKFLYR IKILPMGSYP LILDNNNNAY QLYDRINMFG PVNLFWSSRY DKATTLFLTC LKEFAEFANL
401: KDQENNTPPE KCFRLPYKIE NDNVGNYTIT HSFNKQENWT KALKYTLCNL KWVQLWFVAN SSFQPLSAHA DVPHPQQPPL PIARSPFLSR VFSDRRRPLR
501: NPSRILDLES DRSLLRQPGT ICGAHGLLSA SADLRSMWFW IRRFRLQVRW YVMLA
001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT
Arabidopsis Description
ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.