Factsheet for GSMUA_Achr7P24520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g00950.t01	Wine grape	nucleus	72.36	72.22
PGSC0003DMT400046335	Potato	cytosol	71.4	71.26
GSMUA_Achr7P24530_001	Banana	cytosol	74.66	70.09
Solyc05g050390.2.1	Tomato	cytosol	69.67	69.41
KRH30023	Soybean	cytosol	67.56	69.16
KRH62897	Soybean	cytosol	67.37	68.96
EES01994	Sorghum	cytosol	63.34	66.0
TraesCS3A01G266600.1	Wheat	golgi	63.34	65.61
Os01t0681400-01	Rice	cytosol	62.76	65.4
Zm00001d042303_P001	Maize	cytosol	62.19	64.93
TraesCS3D01G266800.1	Wheat	nucleus	62.76	64.88
Os03t0644000-01	Rice	cytosol	61.8	64.27
AT3G61710.1	Thale cress	cytosol	63.72	64.22
TraesCS3B01G300100.2	Wheat	golgi	62.57	63.3
CDX67858	Canola	nucleus	62.96	62.96
CDY25058	Canola	nucleus	62.76	62.4
CDY25070	Canola	plastid	43.57	59.27
CDY70494	Canola	cytosol, golgi, plastid	59.5	58.71
Os03t0258500-01	Rice	cytosol	59.69	57.27
KXG33125	Sorghum	cytosol	45.68	53.01
Zm00001d011984_P001	Maize	mitochondrion, plastid	58.54	52.68
HORVU3Hr1G062970.2	Barley	plastid	45.11	44.34
Bra003466.1-P	Field mustard	nucleus	53.17	37.03

Protein Annotations

EnsemblPlants:GSMUA_Achr7P24520_001	EnsemblPlants:GSMUA_Achr7T24520_001	EnsemblPlantsGene:GSMUA_Achr7G24520_001	Gene3D:1.10.418.40	GO:GO:0006914	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	InterPro:IPR038274
ncoils:Coil	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	PFAM:PF04111	SEG:seg	UniParc:UPI000296BAA7
UniProt:M0TKD8	MapMan:22.5.1.2	:	:	:	:

Description

Beclin-1-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G24520_001]

Coordinates

chr7:+:26474437..26483409

Molecular Weight (calculated)

59258.2 Da

IEP (calculated)

5.801

GRAVY (calculated)

-0.516

Length

521 amino acids

Sequence
(BLAST)

001: MEDEIGGGDK GKSFPMDPNL PIGVCQNCHH ALCVVGVDSY ADKFFNDPSR SGMQASTVQG SVMGASRMDH SFVVLPKQKY QGHGVPPRPR STTPQPDNSH
101: SAKAIEESYV VLPPAAASMY KSELTPEEGG AQQRFQGGSP SSGLQVNGPG FHSSIILKRA FDIATTQTQV EQPLCLECMR LLSDKLDKEV EDVNRDIKSY
201: EACLKQFEME SYDVLSEADF LQEKAKIGEE ERRLQAEIEE IEKQRLEVNA ELKEVQVKSK EFKELEERYW HEFNSFQFQL ISHQEERDAL LAKIEVSQAH
301: LDLLKRTNVL NDAFSISHDG EFGTINNFRL GRLPKIPVEW DEINAAWGQA CLLLHTMAQH FRPKFLYRIK ILPMGSYPRI MDNNNNAYDL LLLCLSSFGP
401: VNLFWSTRYD KAMTLFLTCL KEFAEFANLK DQENNIPPEK CFRLPYKIEN DKLDSYTITQ SFNKQENWTK ALKYTLCNLK WVQYWFVGNS NFQPLSAMAS
501: SRADVPVMGS SHAKQSADRR S

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.