Factsheet for Zm00001d011984_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01994	Sorghum	cytosol	77.72	90.0
Zm00001d042303_P001	Maize	cytosol	77.2	89.58
TraesCS3D01G266800.1	Wheat	nucleus	70.98	81.55
TraesCS3A01G266600.1	Wheat	golgi	69.95	80.52
TraesCS3B01G300100.2	Wheat	golgi	70.12	78.83
Os01t0681400-01	Rice	cytosol	67.36	78.0
Os03t0644000-01	Rice	cytosol	67.01	77.45
Os03t0258500-01	Rice	cytosol	64.77	69.06
HORVU3Hr1G062970.2	Barley	plastid	54.06	59.06
VIT_15s0046g00950.t01	Wine grape	nucleus	52.85	58.62
GSMUA_Achr7P24520_001	Banana	cytosol	52.68	58.54
PGSC0003DMT400046335	Potato	cytosol	51.99	57.66
Solyc05g050390.2.1	Tomato	cytosol	51.64	57.17
KRH30023	Soybean	cytosol	49.57	56.39
KRH62897	Soybean	cytosol	49.22	55.99
CDY25070	Canola	plastid	35.06	53.0
CDX67858	Canola	nucleus	47.5	52.78
AT3G61710.1	Thale cress	cytosol	46.98	52.61
CDY25058	Canola	nucleus	46.8	51.72
CDY70494	Canola	cytosol, golgi, plastid	45.77	50.19
GSMUA_Achr7P24530_001	Banana	cytosol	46.63	48.65
Bra003466.1-P	Field mustard	nucleus	40.76	31.55

Protein Annotations

EnsemblPlants:Zm00001d011984_P001	EnsemblPlants:Zm00001d011984_T001	EnsemblPlantsGene:Zm00001d011984	EntrezGene:103636340	Gene3D:1.10.418.40	GO:GO:0006914
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf
InterPro:IPR038274	ncoils:Coil	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	PFAM:PF04111	ProteinID:AQK98524.1
SEG:seg	UniParc:UPI000220B11F	UniProt:K7W1X5	MapMan:22.5.1.2	:	:

Description

autophagy6bBeclin-1-like protein

Coordinates

chr8:-:165880817..165886470

Molecular Weight (calculated)

64843.5 Da

IEP (calculated)

7.089

GRAVY (calculated)

-0.513

Length

579 amino acids

Sequence
(BLAST)

001: MRAAATSKYS PCAAFRCCSA GDWRAACLRG YSVSSTSSPP PRSRLPHLSP ADDDDDPPAA ARAPQISRSV PWSRQDEGSM KPTAGASGKG GAVYPSLPRL
101: KCQECRRALV VVGVESYADR LPAHAAPGNH ASSVQDSVMG ASKMDNSYVV LSRQNKVQGP RIPPRPGSAV AAHTDPNQST RAIEGSYIVL PPPSASIYKK
201: SASEGGGAQL TPPGGNSSSP LSGNNSGFHS SVTVLKRAFE VASSQTQVEQ PLCLECMRVL SDKMDKEIED CNADIKSYEA CLQRLQQEPY NILSETDFQK
301: EKQKIEEEEK KLKCAIEEAE KQYSEVSSEM KDLEIKSKQF EELEERYWHE FNSFQFQLTS HQEERDAVFA KIGVSQVHLE MLKHTNVLND AFYISCDEVI
401: ARINNFRLGR LPNVEVEWDE INVAWGQAAL LLHTMAHYFT PKFRYRIKIH PMGSYPRVTD IHNHTYELFG PVNLFWSTRF DKAMTWFLTC LQEFAEFAIS
501: LDKENNVPPE KTLKLPHKID GDKVGNHTIV LSFNQDETWT KALKYMLYDL KFVLSWFIGN TSFAPPSRSL HTQFLKNKS

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.