Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67858 | Canola | nucleus | 57.09 | 81.96 |
| CDY25058 | Canola | nucleus | 56.02 | 79.96 |
| CDY70494 | Canola | cytosol, golgi, plastid | 55.35 | 78.41 |
| AT3G61710.1 | Thale cress | cytosol | 49.73 | 71.95 |
| KRH30023 | Soybean | cytosol | 42.25 | 62.08 |
| KRH62897 | Soybean | cytosol | 42.25 | 62.08 |
| VIT_15s0046g00950.t01 | Wine grape | nucleus | 43.18 | 61.88 |
| Solyc05g050390.2.1 | Tomato | cytosol | 40.78 | 58.32 |
| PGSC0003DMT400046335 | Potato | cytosol | 40.37 | 57.85 |
| GSMUA_Achr7P24520_001 | Banana | cytosol | 37.03 | 53.17 |
| EES01994 | Sorghum | cytosol | 33.69 | 50.4 |
| Zm00001d042303_P001 | Maize | cytosol | 33.56 | 50.3 |
| Os03t0644000-01 | Rice | cytosol | 33.69 | 50.3 |
| TraesCS3A01G266600.1 | Wheat | golgi | 33.82 | 50.3 |
| Os01t0681400-01 | Rice | cytosol | 33.42 | 50.0 |
| TraesCS3D01G266800.1 | Wheat | nucleus | 33.56 | 49.8 |
| TraesCS3B01G300100.2 | Wheat | golgi | 33.42 | 48.54 |
| GSMUA_Achr7P24530_001 | Banana | cytosol | 33.56 | 45.23 |
| Os03t0258500-01 | Rice | cytosol | 32.09 | 44.2 |
| KXG33125 | Sorghum | cytosol | 25.4 | 42.32 |
| Zm00001d011984_P001 | Maize | mitochondrion, plastid | 31.55 | 40.76 |
| HORVU3Hr1G062970.2 | Barley | plastid | 24.2 | 34.15 |
Protein Annotations
| Gene3D:1.10.418.40 | Gene3D:1.20.1280.50 | MapMan:22.5.1.2 | InterPro:Atg6/Beclin | InterPro:Atg6/Beclin_C_sf | EnsemblPlantsGene:Bra003466 |
| EnsemblPlants:Bra003466.1 | EnsemblPlants:Bra003466.1-P | ncoils:Coil | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006914 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| InterPro:IPR038274 | UniProt:M4CGY3 | PFAM:PF04111 | PANTHER:PTHR15537 | PANTHER:PTHR15537:SF3 | SUPFAM:SSF81383 |
| UniParc:UPI0002541871 | SEG:seg | : | : | : | : |
Description
AT3G61710 (E=8e-133) ATATG6 | autophagy protein Apg6 family
Coordinates
chrA07:-:13341026..13347390
Molecular Weight (calculated)
84153.7 Da
IEP (calculated)
8.466
GRAVY (calculated)
-0.543
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTRSSDVQG ANRGKRKAPE GDENGRGKRR SVQSDEQKKA PQIGKKRLAP SNEHKKGKKI LRGIRSCVSP RCSASSTHRP SFFWFEQDVW TYISRFLDGK
101: SLVMLGATSK WFHKTVMEES IWRFACLRDL HVPRPCPVSS SWNKIYASAF DWMRIGAFTL DSRMSLLTES LSGQLKVPRV QGTIDQMLQS TGSCIIKDIK
201: SGIWIADLQL VRCPVCDLST CDGTMQILDT RHIELFLNEE YKAGSWDYNL IGSHKLQKDT SAACGAIYDL KHLKASSSSG ILHLKSWTGE PEDSQPKAFI
301: TTHAVAVHTR LQKNEAAMQG SSIHGANSVL GSTRMDNSFV VLPRHKPQAQ GIPPRPRGAS SPQPHDATHS GKAMDESFVV VYKSESASDS GAASQNTLSS
401: VEVGQNGPLH SNTSGFNSSI NVLNRAFDIA RTQTQVEQPL CLECMRVLSD KLEKEVEDVT RDVEAYEACV QRLEGETQDV LSEADFLREK RKIEEEERKL
501: VAAIEESEKQ NAEVNRQLKE LESKGNRFNE LEDRYWQEFN NFQCQLIAHQ EERDAILAKI EVSQAHLELL NKTNVLIDAF PIRYDGDFGT INNFRLGRLP
601: KAPQFCTEKS VVMIFRFGPV NLFWSTRYDK AMTLYLICLK DFADFANAKD QENNIPPEKC LKLPFKIEND KVESYSITQS FNKQENWTKA LKYTLCNLKW
701: ALYWFVGNTN FQPLSATVSL PSDVSAAGSL YAKRGPGSNN PSSKTSRN
101: SLVMLGATSK WFHKTVMEES IWRFACLRDL HVPRPCPVSS SWNKIYASAF DWMRIGAFTL DSRMSLLTES LSGQLKVPRV QGTIDQMLQS TGSCIIKDIK
201: SGIWIADLQL VRCPVCDLST CDGTMQILDT RHIELFLNEE YKAGSWDYNL IGSHKLQKDT SAACGAIYDL KHLKASSSSG ILHLKSWTGE PEDSQPKAFI
301: TTHAVAVHTR LQKNEAAMQG SSIHGANSVL GSTRMDNSFV VLPRHKPQAQ GIPPRPRGAS SPQPHDATHS GKAMDESFVV VYKSESASDS GAASQNTLSS
401: VEVGQNGPLH SNTSGFNSSI NVLNRAFDIA RTQTQVEQPL CLECMRVLSD KLEKEVEDVT RDVEAYEACV QRLEGETQDV LSEADFLREK RKIEEEERKL
501: VAAIEESEKQ NAEVNRQLKE LESKGNRFNE LEDRYWQEFN NFQCQLIAHQ EERDAILAKI EVSQAHLELL NKTNVLIDAF PIRYDGDFGT INNFRLGRLP
601: KAPQFCTEKS VVMIFRFGPV NLFWSTRYDK AMTLYLICLK DFADFANAKD QENNIPPEKC LKLPFKIEND KVESYSITQS FNKQENWTKA LKYTLCNLKW
701: ALYWFVGNTN FQPLSATVSL PSDVSAAGSL YAKRGPGSNN PSSKTSRN
001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT
Arabidopsis Description
ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.