Factsheet for Solyc05g050390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046335	Potato	cytosol	94.65	94.83
VIT_15s0046g00950.t01	Wine grape	nucleus	79.35	79.5
KRH30023	Soybean	cytosol	73.42	75.44
KRH62897	Soybean	cytosol	73.42	75.44
AT3G61710.1	Thale cress	cytosol	69.79	70.6
GSMUA_Achr7P24520_001	Banana	cytosol	69.41	69.67
CDX67858	Canola	nucleus	68.07	68.33
CDY25058	Canola	nucleus	68.26	68.13
TraesCS3A01G266600.1	Wheat	golgi	63.1	65.61
TraesCS3D01G266800.1	Wheat	nucleus	62.91	65.28
EES01994	Sorghum	cytosol	62.14	65.0
CDY70494	Canola	cytosol, golgi, plastid	65.58	64.96
CDY25070	Canola	plastid	47.42	64.75
TraesCS3B01G300100.2	Wheat	golgi	63.1	64.08
Zm00001d042303_P001	Maize	cytosol	60.8	63.73
Os01t0681400-01	Rice	cytosol	60.61	63.4
Os03t0644000-01	Rice	cytosol	60.23	62.87
GSMUA_Achr7P24530_001	Banana	cytosol	59.08	55.68
Os03t0258500-01	Rice	cytosol	57.55	55.43
KXG33125	Sorghum	cytosol	45.51	53.01
Zm00001d011984_P001	Maize	mitochondrion, plastid	57.17	51.64
HORVU3Hr1G062970.2	Barley	plastid	45.12	44.53
Bra003466.1-P	Field mustard	nucleus	58.32	40.78

Protein Annotations

Gene3D:1.10.418.40	MapMan:22.5.1.2	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	ncoils:Coil	GO:GO:0000003
GO:GO:0000045	GO:GO:0000407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006623	GO:GO:0006810	GO:GO:0006914	GO:GO:0006950	GO:GO:0006995	GO:GO:0007154
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009607	GO:GO:0009846
GO:GO:0009856	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016043	GO:GO:0031410
GO:GO:0034271	GO:GO:0034272	GO:GO:0044804	GO:GO:0045324	GO:GO:0050832	InterPro:IPR038274
UniProt:K4C171	PFAM:PF04111	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	EnsemblPlantsGene:Solyc05g050390.2	EnsemblPlants:Solyc05g050390.2.1
UniParc:UPI0002767068	SEG:seg	:	:	:	:

Description

Beclin-1-like protein [Source:Projected from Arabidopsis thaliana (AT3G61710) UniProtKB/Swiss-Prot;Acc:Q9M367]

Coordinates

chr5:-:60504949..60512133

Molecular Weight (calculated)

59229.0 Da

IEP (calculated)

5.952

GRAVY (calculated)

-0.548

Length

523 amino acids

Sequence
(BLAST)

001: MVKGSSATPD KGRTLPVDPN LPRYICQNCH NPLCIAGVDN YADKFFPDSS YRSGMQASSI HGAGSAIGST SRMENSYVML PKQRNQGSGI PPRGRGSAQP
101: DASQFGRAME ESFVVLPPPA ASVYKCEPTS DGSGTNLPSP DGGPPNAPMQ SNNSGFHSTI TVLKRAFDIA TTQTQIEQPL CLECMRVLSD KLDKEVEDVN
201: RDIQAYEACL HQLEGEARNV LSEADFLKEK LKIEEEERKL ETAIEETEKQ CAVVTAELKE LEMKSGRFKE LEERYWQEFN NFQFQLISHQ EERDAILAKT
301: EVSQAHLELL KRTNVLNDAF PIWYDGEFGT INNFRLGRLP KIPVEWDEIN AAWGQACLLL HTMAQHFRPK FQYRIKIIPM GSYPRIIDTN NTTYELFGPV
401: NLFWSTRYDK AMTLFLICLK EFSEFANSKD RENNIRPDKC FKLPYKIEND KVESYSITQS FNKQENWTKA LKYTLCNLKW VLYWFVGNTN FQPLSGTVSS
501: QAEVPAAAGS LYSKQPTNTK FQS

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.