Factsheet for Os03t0644000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G266800.1	Wheat	nucleus	85.83	85.32
TraesCS3A01G266600.1	Wheat	golgi	85.63	85.29
Os01t0681400-01	Rice	cytosol	84.43	84.6
TraesCS3B01G300100.2	Wheat	golgi	85.23	82.91
Zm00001d042303_P001	Maize	cytosol	82.24	82.57
EES01994	Sorghum	cytosol	81.84	82.0
Os03t0258500-01	Rice	cytosol	79.64	73.48
Zm00001d011984_P001	Maize	mitochondrion, plastid	77.45	67.01
KXG33125	Sorghum	cytosol	57.09	63.7
GSMUA_Achr7P24520_001	Banana	cytosol	64.27	61.8
PGSC0003DMT400046335	Potato	cytosol	63.67	61.11
VIT_15s0046g00950.t01	Wine grape	nucleus	63.07	60.54
Solyc05g050390.2.1	Tomato	cytosol	62.87	60.23
KRH30023	Soybean	cytosol	60.88	59.92
KRH62897	Soybean	cytosol	59.88	58.94
HORVU3Hr1G062970.2	Barley	plastid	62.28	58.87
AT3G61710.1	Thale cress	cytosol	57.09	55.32
CDX67858	Canola	nucleus	57.09	54.89
CDY25070	Canola	plastid	41.52	54.31
CDY25058	Canola	nucleus	56.49	54.01
CDY70494	Canola	cytosol, golgi, plastid	55.49	52.65
GSMUA_Achr7P24530_001	Banana	cytosol	57.48	51.89
Bra003466.1-P	Field mustard	nucleus	50.3	33.69

Protein Annotations

Gene3D:1.10.418.40	MapMan:22.5.1.2	EntrezGene:4333557	ProteinID:AAU90282.1	ProteinID:ABF97853.1	EMBL:AK066359
EMBL:AK099664	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	ProteinID:BAF12670.1	ProteinID:BAS85457.1	ncoils:Coil
GO:GO:0000045	GO:GO:0000407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006914	GO:GO:0006950	GO:GO:0006995	GO:GO:0007154	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020
GO:GO:0016043	GO:GO:0031410	GO:GO:0034271	GO:GO:0034272	GO:GO:0044804	GO:GO:0045324
InterPro:IPR038274	EnsemblPlantsGene:Os03g0644000	EnsemblPlants:Os03t0644000-01	PFAM:PF04111	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4
UniProt:Q60DN7	UniParc:UPI00004447F3	RefSeq:XP_015630388.1	SEG:seg	:	:

Description

AUTOPHAGY ASSOCIATED GENE 6BATG6/Beclin-1 protein, Abiotic stresses (heat,cold and drought) and hormone (abscisic acid) response (Os03t0644000-01)

Coordinates

chr3:+:24835605..24841302

Molecular Weight (calculated)

56257.8 Da

IEP (calculated)

6.154

GRAVY (calculated)

-0.418

Length

501 amino acids

Sequence
(BLAST)

001: MKPPASSAAA AGDKGGGVDP SLPRFKCQEC QRALVVVGVE SFTDKLPAHA VSGMNVSSVQ GSVMGASRMD NSYVVLSKQN RSHSHGIPPR PPSAGIPRAE
101: PNQPTRAMEG SYIVLPPAAA SIYKTSASEG GGAQLSPTSM NPGSPLPGNN FHSSVTVLKR AFEIATSQTQ IEQPLCLDCM RLLSDKMEKE IEDVNTDNKA
201: YEACLQRLEQ ETYNILSETD FQKERQKIEE EEKKLKAAIE EAEKQYSEIC SEMKCLETKS KQFEELEERY CHDLNSFQFQ WISHQEERDA VLAKIEVSQV
301: HLELLKRTNV LNDAFYISHD GVIGTINNFR LGRLPNVQVE WDEINAAWGQ AALLLHTMAQ YFFPKFEYRI KIHPMGSYPK VTDINQNTYE LFGPVNLFWS
401: TRFDKAMTWF LTCLQEFADF AVSLDKENNV PPDKSLKLPY KIEGDKVGSY TIFLSFNKLD NWTKALKYML CNLKWVLYWF IGNTSFAPPS GSLHVAQSSK
501: G

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.