Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67858 | Canola | nucleus | 86.07 | 85.41 |
| CDY25058 | Canola | nucleus | 86.27 | 85.11 |
| CDY70494 | Canola | cytosol, golgi, plastid | 81.04 | 79.36 |
| CDY25070 | Canola | plastid | 58.41 | 78.85 |
| VIT_15s0046g00950.t01 | Wine grape | nucleus | 74.66 | 73.95 |
| KRH30023 | Soybean | cytosol | 72.53 | 73.67 |
| KRH62897 | Soybean | cytosol | 71.95 | 73.08 |
| Solyc05g050390.2.1 | Tomato | cytosol | 70.6 | 69.79 |
| PGSC0003DMT400046335 | Potato | cytosol | 70.41 | 69.73 |
| GSMUA_Achr7P24520_001 | Banana | cytosol | 64.22 | 63.72 |
| EES01994 | Sorghum | cytosol | 56.67 | 58.6 |
| TraesCS3A01G266600.1 | Wheat | golgi | 56.48 | 58.05 |
| TraesCS3D01G266800.1 | Wheat | nucleus | 56.29 | 57.74 |
| Zm00001d042303_P001 | Maize | cytosol | 55.71 | 57.72 |
| Os03t0644000-01 | Rice | cytosol | 55.32 | 57.09 |
| Os01t0681400-01 | Rice | cytosol | 55.13 | 57.0 |
| TraesCS3B01G300100.2 | Wheat | golgi | 55.9 | 56.12 |
| GSMUA_Achr7P24530_001 | Banana | cytosol | 56.67 | 52.79 |
| Bra003466.1-P | Field mustard | nucleus | 71.95 | 49.73 |
| Os03t0258500-01 | Rice | cytosol | 51.84 | 49.36 |
| KXG33125 | Sorghum | cytosol | 41.78 | 48.11 |
| Zm00001d011984_P001 | Maize | mitochondrion, plastid | 52.61 | 46.98 |
| HORVU3Hr1G062970.2 | Barley | plastid | 39.65 | 38.68 |
Protein Annotations
| Gene3D:1.10.418.40 | MapMan:22.5.1.2 | EntrezGene:825344 | ProteinID:AEE80244.1 | ProteinID:AEE80245.1 | ProteinID:AEE80246.1 |
| ArrayExpress:AT3G61710 | EnsemblPlantsGene:AT3G61710 | RefSeq:AT3G61710 | TAIR:AT3G61710 | RefSeq:AT3G61710-TAIR-G | EnsemblPlants:AT3G61710.1 |
| TAIR:AT3G61710.1 | Symbol:ATATG6 | EMBL:AY039613 | Unigene:At.958 | InterPro:Atg6/Beclin | InterPro:Atg6/Beclin_C_sf |
| Symbol:BECLIN1 | EMBL:BT000508 | ProteinID:CAB71101.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0000045 |
| GO:GO:0000407 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0006623 | GO:GO:0006810 | GO:GO:0006914 |
| GO:GO:0006950 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009846 | GO:GO:0009856 | GO:GO:0009987 | GO:GO:0009991 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0031410 | GO:GO:0034271 | GO:GO:0034272 | GO:GO:0044804 |
| GO:GO:0045324 | GO:GO:0050832 | InterPro:IPR038274 | RefSeq:NP_001030914.1 | RefSeq:NP_567116.1 | RefSeq:NP_974475.1 |
| PFAM:PF04111 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12768 | PANTHER:PTHR12768:SF4 | UniProt:Q9M367 | UniParc:UPI00000ABF9B |
| SEG:seg | : | : | : | : | : |
Description
ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
Coordinates
chr3:-:22839232..22842446
Molecular Weight (calculated)
58507.1 Da
IEP (calculated)
5.709
GRAVY (calculated)
-0.555
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.