Factsheet for Os03t0258500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0681400-01	Rice	cytosol	84.9	92.2
TraesCS3D01G266800.1	Wheat	nucleus	74.4	80.16
TraesCS3A01G266600.1	Wheat	golgi	74.22	80.12
Os03t0644000-01	Rice	cytosol	73.48	79.64
EES01994	Sorghum	cytosol	73.11	79.4
Zm00001d042303_P001	Maize	cytosol	72.19	78.56
TraesCS3B01G300100.2	Wheat	golgi	73.48	77.48
Zm00001d011984_P001	Maize	mitochondrion, plastid	69.06	64.77
KXG33125	Sorghum	cytosol	52.12	63.03
GSMUA_Achr7P24520_001	Banana	cytosol	57.27	59.69
VIT_15s0046g00950.t01	Wine grape	nucleus	56.54	58.81
PGSC0003DMT400046335	Potato	cytosol	55.99	58.24
HORVU3Hr1G062970.2	Barley	plastid	56.35	57.74
Solyc05g050390.2.1	Tomato	cytosol	55.43	57.55
KRH30023	Soybean	cytosol	53.78	57.37
KRH62897	Soybean	cytosol	53.41	56.97
CDY25070	Canola	plastid	36.83	52.22
AT3G61710.1	Thale cress	cytosol	49.36	51.84
CDX67858	Canola	nucleus	49.72	51.82
CDY25058	Canola	nucleus	49.72	51.53
GSMUA_Achr7P24530_001	Banana	cytosol	52.12	50.99
CDY70494	Canola	cytosol, golgi, plastid	48.8	50.19
Bra003466.1-P	Field mustard	nucleus	44.2	32.09

Protein Annotations

Gene3D:1.10.418.40	MapMan:22.5.1.2	ProteinID:ABF95063.1	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	ProteinID:BAH92083.1
ProteinID:BAS83339.1	ncoils:Coil	ProteinID:EAZ26321.1	GO:GO:0000045	GO:GO:0000407	GO:GO:0003674
GO:GO:0003824	GO:GO:0004144	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006810	GO:GO:0006914	GO:GO:0006950	GO:GO:0006995	GO:GO:0007154
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009605	GO:GO:0009987
GO:GO:0009991	GO:GO:0016020	GO:GO:0016043	GO:GO:0016740	GO:GO:0031410	GO:GO:0034271
GO:GO:0034272	GO:GO:0044804	GO:GO:0045017	GO:GO:0045324	InterPro:IPR038274	EnsemblPlantsGene:Os03g0258500
EnsemblPlants:Os03t0258500-01	PFAM:PF04111	PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	UniProt:Q10NU3	UniParc:UPI0000DB4CEB
SEG:seg	:	:	:	:	:

Description

AUTOPHAGY ASSOCIATED GENE 6CATG6/Beclin-1 protein, Abiotic stresses (heat,cold and drought) and hormone (abscisic acid) response (Os03t0258500-01)

Coordinates

chr3:+:8369347..8370978

Molecular Weight (calculated)

61151.6 Da

IEP (calculated)

6.350

GRAVY (calculated)

-0.414

Length

543 amino acids

Sequence
(BLAST)

001: MSVTVCSCDD ESVPTLFHRL RLRFDLRGRH EIGASGRRKS REVEREDHSV GERVGVIDSG DMKPPAAAAA GNRAGGVDPS IPRFKCQECH RALVVVGVDS
101: FAADKLPAQA TSGHVSSVHG SIMGASRMDN SYVVLSKQNK SHGHGIPPRP PSAAAPHIEP NQPTRAMEGS YIVLPPAAAS IYKTSTSEGG GAQLPPPSIN
201: SSSLLTGNSF HSNVTVLKRA FEIATSQTQV EQPMCLGCMR LLSDKMDKEI EDVNADIKAH EVCLQHLEQE SYNVLSDAGF QEEKLKIEEE EKKLNAAIEE
301: AEKQYSEISS EMKDLEIKSK EFEELEERYW HEFNSFQFQL TSHQEEREAI LAKIEVSQVH LELLKRRNVL NDAFYISHDG VIGTINNFRL GRLPNVQVEW
401: DEINAAWGQA ALLLHTMAQY FTPKFEYRIK IHPMGSYARV TDIHKNTYEL YIMLTRFGPV DLFWSTRFDK AMTWFLTCLQ DFAEFAISLD KENNVPPEKS
501: LKLPYKIDGD KVGSHTIFLS FNKVENWTKA LKYTLCNLKW VLY

Best Arabidopsis Sequence Match ( AT3G61710.1 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQCQVKIQP MGSYPRIVDS NNETYELFGP VNLFWSTRYD
401: KAMTLYLMCL KDFADFANSK DQENNIPPDN CLNLPYKIEK DKVLGYSITQ SFNKQESWTK ALKYTLCNLK WALYWFVGNT NFQPLSATVS LPSNISAAGS
501: LYAKRGPDSS KPSCKKT

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.