Factsheet for HORVU3Hr1G062970.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G266800.1	Wheat	nucleus	67.92	71.43
TraesCS3A01G266600.1	Wheat	golgi	66.79	70.38
TraesCS3B01G300100.2	Wheat	golgi	67.17	69.13
Zm00001d042303_P001	Maize	cytosol	59.06	62.73
EES01994	Sorghum	cytosol	59.06	62.6
Os03t0644000-01	Rice	cytosol	58.87	62.28
Os01t0681400-01	Rice	cytosol	57.74	61.2
KXG33125	Sorghum	cytosol	50.57	59.69
Os03t0258500-01	Rice	cytosol	57.74	56.35
Zm00001d011984_P001	Maize	mitochondrion, plastid	59.06	54.06
PGSC0003DMT400046335	Potato	cytosol	44.91	45.59
VIT_15s0046g00950.t01	Wine grape	nucleus	44.53	45.21
CDY25070	Canola	plastid	32.64	45.17
Solyc05g050390.2.1	Tomato	cytosol	44.53	45.12
GSMUA_Achr7P24520_001	Banana	cytosol	44.34	45.11
KRH30023	Soybean	cytosol	41.7	43.42
KRH62897	Soybean	cytosol	40.75	42.44
AT3G61710.1	Thale cress	cytosol	38.68	39.65
CDX67858	Canola	nucleus	38.3	38.96
CDY25058	Canola	nucleus	37.74	38.17
CDY70494	Canola	cytosol, golgi, plastid	36.79	36.93
GSMUA_Achr7P24530_001	Banana	cytosol	38.49	36.76
Bra003466.1-P	Field mustard	nucleus	34.15	24.2

Protein Annotations

EnsemblPlants:HORVU3Hr1G062970.2	EnsemblPlantsGene:HORVU3Hr1G062970	Gene3D:1.10.418.40	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	InterPro:Atg6/Beclin	InterPro:Atg6/Beclin_C_sf	InterPro:IPR038274	ncoils:Coil
PANTHER:PTHR12768	PANTHER:PTHR12768:SF4	PFAM:PF04111	SEG:seg	UniParc:UPI000B45FC8B	UniProt:A0A287LB28
MapMan:22.5.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:481649826..481656817

Molecular Weight (calculated)

58303.3 Da

IEP (calculated)

7.821

GRAVY (calculated)

-0.541

Length

530 amino acids

Sequence
(BLAST)

001: PTPLPPLGPL PALASPFSAL SLLLSAPRPR PPPPGADVLA LLPRPLPAHQ HRPRRREKVP LDTDRQAGPT RGVGAPRQGD FRTRFCVRLK SPDSARDSSR
101: PSWCGVQVGL TAPPIRSPHA GVHQESKLGE KGGGILLHTH SFGITQPRQR PELSPSYCCG MKPKVAGAAA AGEKGRGVDP SLPRFKCQEC HRALVVVGVE
201: SFPDRLPAHA NSGMHASSVQ GSIMGASRMD SSYVVLSKQN RPQGPGIPPR PPSAAARHVE PNQSTRAMEG SYIMLPPAAA SIYKTSTSEG GGAHLSPPNL
301: NSTSPSPGNN SGFHSSVTVL KRAFEIASSQ TQVEQPLCLE CMRVLSDKMD KEIEDVNTDI KAYDACLQRL EQESYNILSE TDFLKEKEKI EEEEKKLKAA
401: IEEAEKQYSE VSSEMKDLET KSKQFEELEE RYWHEFNSFQ FQLTSHQEER DAVMAKIEVS QVHLELLKRT NVLNDAFYIS HDGVIGTINS FRLGRLPNVQ
501: VEWDEINAAW GQAALLLHTM AQYFPKFQYP

Best Arabidopsis Sequence Match ( AT3G61710.2 )
(BLAST)

001: MRKEEIPDKS RTIPIDPNLP KWVCQNCHHS LTIVGVDSYA GKFFNDPPPS ATQGSSIHGA NSVLGSTRMD NSFVVLPRHK PPQSQGIPPR PRGASSPQPD
101: ATQSGKAMEE SFVVVYKSEP VSDSGGSHNL SLEVGQNGPL HSNTSGFNAT INVLTRAFDI ARTQTQVEQP LCLECMRVLS DKLEKEVEDV TRDVEAYEAC
201: VQRLEGETQD VLSEADFLKE KKKIEEEERK LVAAIEETEK QNAEVNHQLK ELEFKGNRFN ELEDRYWQEF NNFQFQLIAH QEERDAILAK IEVSQAHLEL
301: LNKTNVLIDA FPIRNDGEFG TINNFRLGRL PAIKVEWDEI NAAWGQACLL LHTMCNYFRP KFQYPYNYLT VLFLILPFLF DSVDCI

Arabidopsis Description

ATG6Beclin-1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9M367]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.