Factsheet for Zm00001d048003_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008821_P001	Maize	extracellular	70.59	84.51
VIT_00s2472g00010.t01	Wine grape	cytosol, peroxisome	45.88	50.98
Zm00001d002560_P001	Maize	mitochondrion	69.41	24.79
Solyc07g021140.1.1	Tomato	cytosol	9.41	12.21
EES05610	Sorghum	plastid	69.41	8.83
Zm00001d017883_P002	Maize	plastid	70.0	8.71
Solyc03g071660.1.1	Tomato	cytosol	9.41	8.56
GSMUA_Achr3P10880_001	Banana	plastid	58.82	8.38
Os02t0722800-01	Rice	plasma membrane	60.59	7.69
GSMUA_Achr5P04250_001	Banana	plastid	54.71	7.6
Bra034693.1-P	Field mustard	cytosol	51.18	7.55
GSMUA_Achr3P04200_001	Banana	plastid	53.53	7.47
KRG98417	Soybean	cytosol	48.24	7.35
CDY23580	Canola	plastid	51.18	7.2
CDY44010	Canola	plastid	51.76	7.1
GSMUA_Achr9P19760_001	Banana	plastid	55.29	7.07
AT3G13300.1	Thale cress	cytosol	54.12	6.85
CDY44011	Canola	plastid	51.18	6.78
CDY23587	Canola	plastid	51.18	6.74
AT3G13290.1	Thale cress	cytosol	52.94	6.72
Zm00001d051678_P001	Maize	cytosol	54.12	6.63
Bra034692.1-P	Field mustard	cytosol, plastid	51.76	6.62
VIT_00s0455g00020.t01	Wine grape	plastid	52.94	6.55
KRH46493	Soybean	plastid	51.76	6.54
VIT_19s0015g01380.t01	Wine grape	plastid	52.94	6.42
Solyc10g005920.2.1	Tomato	plastid	51.76	6.21
KRH11647	Soybean	endoplasmic reticulum	51.18	6.19
KRH36660	Soybean	endoplasmic reticulum	51.18	6.18
TraesCS6A01G286100.3	Wheat	golgi	45.88	6.16
TraesCS6D01G266500.2	Wheat	cytosol, plastid	45.88	5.9
TraesCS6B01G314800.3	Wheat	plastid	45.88	5.75
HORVU6Hr1G071910.3	Barley	cytosol, nucleus, plastid	45.88	5.62
Solyc07g065950.2.1	Tomato	plastid	45.88	5.54
Solyc11g032180.1.1	Tomato	cytosol	2.94	5.43
Solyc09g055300.1.1	Tomato	cytosol	2.35	4.49
KRH46495	Soybean	cytosol	13.53	3.73
Solyc12g062490.1.1	Tomato	nucleus, plastid	2.35	3.28
KRH63269	Soybean	cytosol	2.94	3.12
Solyc02g005370.1.1	Tomato	cytosol	1.76	2.17
Solyc11g039850.1.1	Tomato	cytosol	1.18	1.92
VIT_03s0091g01220.t01	Wine grape	cytosol	2.35	1.22
VIT_00s1618g00010.t01	Wine grape	cytosol	0.59	0.26
VIT_03s0091g01230.t01	Wine grape	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d048003_P001	EnsemblPlants:Zm00001d048003_T001	EnsemblPlantsGene:Zm00001d048003	Gene3D:1.10.220.100	PANTHER:PTHR15598	PANTHER:PTHR15598:SF6
ProteinID:AQL08304.1	UniParc:UPI00084421D6	UniProt:A0A1D6PFM9	MapMan:35.1	:	:

Description

Enhancer of mRNA-decapping protein 4

Coordinates

chr9:+:147681450..147682418

Molecular Weight (calculated)

18965.2 Da

IEP (calculated)

5.521

GRAVY (calculated)

0.314

Length

170 amino acids

Sequence
(BLAST)

001: MAVTSLMMFV ESLQVNIKAA MKLDEGSCSR LTTLTETHTR QSYIEFLGDL LFKFDEAFTM ALQRSDVSIV SWLCSQVDLR ALCAMVPVPL NQGVFLALLQ
101: QLAIDIHNET SRKVQWMTDV AMAINPADQI IAVHVPPIFE QVYSQLAHQR TLPTAASDGT SIRVIMHVIN

Best Arabidopsis Sequence Match ( AT3G13290.1 )
(BLAST)

0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK

Arabidopsis Description

VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.