Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 9.24 | 73.86 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 67.95 | 68.17 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 62.14 | 63.65 |
| Zm00001d008821_P001 | Maize | extracellular | 7.28 | 62.68 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 64.27 | 59.14 |
| KRH63269 | Soybean | cytosol | 7.52 | 57.5 |
| Solyc03g071660.1.1 | Tomato | cytosol | 8.5 | 55.62 |
| Zm00001d048003_P001 | Maize | extracellular | 7.6 | 54.71 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 58.54 | 52.15 |
| Os02t0722800-01 | Rice | plasma membrane | 56.58 | 51.68 |
| TraesCS7D01G221700.1 | Wheat | plastid | 54.05 | 51.56 |
| EES05610 | Sorghum | plastid | 56.34 | 51.53 |
| KRG98417 | Soybean | cytosol | 46.93 | 51.43 |
| Os06t0300800-01 | Rice | plasma membrane | 55.93 | 51.27 |
| Solyc07g021140.1.1 | Tomato | cytosol | 5.48 | 51.15 |
| TraesCS7A01G220400.4 | Wheat | plastid | 54.37 | 50.88 |
| TraesCS7B01G127000.4 | Wheat | plastid | 54.37 | 50.84 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 58.22 | 50.82 |
| Zm00001d017883_P002 | Maize | plastid | 56.26 | 50.37 |
| KRH46493 | Soybean | plastid | 55.19 | 50.15 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 13.16 | 49.24 |
| Bra034693.1-P | Field mustard | cytosol | 46.36 | 49.18 |
| TraesCS6A01G286100.3 | Wheat | golgi | 50.61 | 48.86 |
| CDY44010 | Canola | plastid | 49.14 | 48.51 |
| CDY23580 | Canola | plastid | 47.83 | 48.39 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.52 | 48.31 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 52.17 | 48.3 |
| Solyc11g032180.1.1 | Tomato | cytosol | 3.6 | 47.83 |
| KRH36660 | Soybean | endoplasmic reticulum | 54.87 | 47.69 |
| KRH11647 | Soybean | endoplasmic reticulum | 54.46 | 47.4 |
| TraesCS6B01G314800.3 | Wheat | plastid | 52.17 | 47.05 |
| Solyc07g065950.2.1 | Tomato | plastid | 54.05 | 46.98 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 14.8 | 46.65 |
| AT3G13290.1 | Thale cress | cytosol | 50.86 | 46.42 |
| Solyc10g005920.2.1 | Tomato | plastid | 53.72 | 46.33 |
| AT3G13300.1 | Thale cress | cytosol | 50.78 | 46.21 |
| HORVU7Hr1G045240.3 | Barley | plastid | 30.25 | 46.13 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 50.12 | 46.09 |
| Zm00001d051678_P001 | Maize | cytosol | 52.25 | 46.07 |
| CDY23587 | Canola | plastid | 48.57 | 46.05 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 52.17 | 45.97 |
| Solyc02g005370.1.1 | Tomato | cytosol | 5.15 | 45.65 |
| CDY44011 | Canola | plastid | 47.75 | 45.48 |
| Solyc11g039850.1.1 | Tomato | cytosol | 3.84 | 45.19 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 4.42 | 44.26 |
| Zm00001d002560_P001 | Maize | mitochondrion | 17.09 | 43.91 |
| KRH46495 | Soybean | cytosol | 21.01 | 41.72 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 4.91 | 22.99 |
Protein Annotations
| Gene3D:1.10.220.100 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | ncoils:Coil | InterPro:EDC4_WD40 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr5G04250_001 | EnsemblPlants:GSMUA_Achr5P04250_001 | EnsemblPlants:GSMUA_Achr5T04250_001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0SVK4 | PFAM:PF16529 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR15598 | PANTHER:PTHR15598:SF7 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0002961921 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
WD domain, G-beta repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G04250_001]
Coordinates
chr5:-:3073685..3088670
Molecular Weight (calculated)
133368.0 Da
IEP (calculated)
5.431
GRAVY (calculated)
-0.301
Length
1223 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPAGNPNL FKLPNPNPSI SPPTLPPPSS YPATPPSYPS PPAHGAFSYP PVTPPFHHQP PFLHYPQDPL HRPALPRGRL LGVGNRAVYD VDSRLPGESQ
0101: PPQLEVTPIT KYVSDPGLVL GRQIAVNRTY ICYGLKLGAI RVLNINTALR ALLKGHSQRV TDMAFFAEDV HLLASASIDG RVFVWKIDEG PDEGNKPLIT
0201: EKIIIALQIV GDGEPYHPRI CWHSHKQEIL FVGIGNRVLK IDTIKIGRGK EFSAEEPLKC SVEKLVDGVQ LIGKHDGEVT DLSISQWMIT RLVSASKDGM
0301: VKIWEDRKAI ALATLRPHDG QPVNSVAFMT SPHQPDHINL ITAGPLNREV KIWTSSNEEG WLLPSDSESW RCTQTLDLKS SSEPRLEEAF FNQIVVLPQA
0401: NLIVIANAKK NAIYAVHVDY GTCPASTRMD YVADFTVAMP ILSLTGTNDF LPDGGQSVQI YCVQTQAIQQ YALDLTQCLP PPTDNAGLAK DPLSCVLGTP
0501: SPEASSVLES SSSSEVMDVC EPPMSKPESK PSAPFSEKDT DAQHVSSFPA NPDLAGRVPS LNSPHKGSDH GSSIGDHVVD QSVFDHSVDS TPDVPSINEN
0601: LKKDDSKTEQ DDPSMVPNRA ISSSESSHVN QGPVVEGVKV QDVIIDNNMA SHEVEVKVVR EGQSGEAEGN GFQKVPQVVI IEDYERSSQT LEAKFEANNE
0701: CSTVIEACQG GHTAETLDQP PSILEEEVEY NKKDMPEKES AITPQNLSAT KGKKQKSKQY QTTGVSPPSS SPFNSTDSLN EPGSFSSTPT DAAIPQILAL
0801: QETLNQIMNM QKEMQKQMSI MVAAPVMKEG KRVEAALGRC MEKAVRANSD ALWARFQEEH AKCERVGKDQ MQQMANLITN IVNKDLPAIS EKILKKEISA
0901: VGPTVVRAIT PVISSAITES FQRGVGDKAV NHLERSVSSK LEATVSRQIQ TQLQTSGKQV LQDALRSCVE SSVVPAFEQS CKAMFEQIDC VFQKGMNEHT
1001: AASQQQLEAA HTPLALTLRD TINSSLSITQ NLTTELVDGQ RKLLALVASG NTKTTSPTTI QQTNGPLPGL PEMALSVQQV EAPLDPKKEL SRLTSERKYE
1101: EAFTMALQRS DVSIVSWLCT QVDLRTICYT VPLPLSQGVL LALLQQLACD ISIETPRKLG WMTDVAVVIN PADPTITSYV RPIFEQVYSI LVHQRSLPTA
1201: TASEATNMRL VMHVINSVLM SCK
0101: PPQLEVTPIT KYVSDPGLVL GRQIAVNRTY ICYGLKLGAI RVLNINTALR ALLKGHSQRV TDMAFFAEDV HLLASASIDG RVFVWKIDEG PDEGNKPLIT
0201: EKIIIALQIV GDGEPYHPRI CWHSHKQEIL FVGIGNRVLK IDTIKIGRGK EFSAEEPLKC SVEKLVDGVQ LIGKHDGEVT DLSISQWMIT RLVSASKDGM
0301: VKIWEDRKAI ALATLRPHDG QPVNSVAFMT SPHQPDHINL ITAGPLNREV KIWTSSNEEG WLLPSDSESW RCTQTLDLKS SSEPRLEEAF FNQIVVLPQA
0401: NLIVIANAKK NAIYAVHVDY GTCPASTRMD YVADFTVAMP ILSLTGTNDF LPDGGQSVQI YCVQTQAIQQ YALDLTQCLP PPTDNAGLAK DPLSCVLGTP
0501: SPEASSVLES SSSSEVMDVC EPPMSKPESK PSAPFSEKDT DAQHVSSFPA NPDLAGRVPS LNSPHKGSDH GSSIGDHVVD QSVFDHSVDS TPDVPSINEN
0601: LKKDDSKTEQ DDPSMVPNRA ISSSESSHVN QGPVVEGVKV QDVIIDNNMA SHEVEVKVVR EGQSGEAEGN GFQKVPQVVI IEDYERSSQT LEAKFEANNE
0701: CSTVIEACQG GHTAETLDQP PSILEEEVEY NKKDMPEKES AITPQNLSAT KGKKQKSKQY QTTGVSPPSS SPFNSTDSLN EPGSFSSTPT DAAIPQILAL
0801: QETLNQIMNM QKEMQKQMSI MVAAPVMKEG KRVEAALGRC MEKAVRANSD ALWARFQEEH AKCERVGKDQ MQQMANLITN IVNKDLPAIS EKILKKEISA
0901: VGPTVVRAIT PVISSAITES FQRGVGDKAV NHLERSVSSK LEATVSRQIQ TQLQTSGKQV LQDALRSCVE SSVVPAFEQS CKAMFEQIDC VFQKGMNEHT
1001: AASQQQLEAA HTPLALTLRD TINSSLSITQ NLTTELVDGQ RKLLALVASG NTKTTSPTTI QQTNGPLPGL PEMALSVQQV EAPLDPKKEL SRLTSERKYE
1101: EAFTMALQRS DVSIVSWLCT QVDLRTICYT VPLPLSQGVL LALLQQLACD ISIETPRKLG WMTDVAVVIN PADPTITSYV RPIFEQVYSI LVHQRSLPTA
1201: TASEATNMRL VMHVINSVLM SCK
0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
Arabidopsis Description
VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.