Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G127000.4 | Wheat | plastid | 98.13 | 96.18 |
| TraesCS7A01G220400.4 | Wheat | plastid | 97.58 | 95.72 |
| HORVU7Hr1G045240.3 | Barley | plastid | 51.79 | 82.79 |
| Os06t0300800-01 | Rice | plasma membrane | 77.15 | 74.14 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 65.83 | 63.89 |
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 7.57 | 63.4 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 51.72 | 55.53 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 51.56 | 54.05 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 51.17 | 53.81 |
| KRH63269 | Soybean | cytosol | 6.63 | 53.12 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 54.68 | 52.75 |
| Solyc03g071660.1.1 | Tomato | cytosol | 7.41 | 50.8 |
| Solyc07g021140.1.1 | Tomato | cytosol | 4.99 | 48.85 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 52.03 | 48.58 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 51.09 | 46.75 |
| KRH46493 | Soybean | plastid | 48.91 | 46.58 |
| CDY44010 | Canola | plastid | 44.23 | 45.76 |
| CDY23580 | Canola | plastid | 42.98 | 45.57 |
| KRH11647 | Soybean | endoplasmic reticulum | 49.77 | 45.41 |
| KRH36660 | Soybean | endoplasmic reticulum | 49.77 | 45.34 |
| KRG98417 | Soybean | cytosol | 39.24 | 45.07 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.12 | 44.94 |
| AT3G13300.1 | Thale cress | cytosol | 47.11 | 44.94 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 13.57 | 44.85 |
| Bra034693.1-P | Field mustard | cytosol | 40.25 | 44.75 |
| CDY23587 | Canola | plastid | 44.62 | 44.34 |
| AT3G13290.1 | Thale cress | cytosol | 46.18 | 44.18 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 45.32 | 43.68 |
| Solyc07g065950.2.1 | Tomato | plastid | 47.82 | 43.57 |
| Solyc11g032180.1.1 | Tomato | cytosol | 3.12 | 43.48 |
| CDY44011 | Canola | plastid | 43.37 | 43.3 |
| Solyc11g039850.1.1 | Tomato | cytosol | 3.51 | 43.27 |
| Solyc02g005370.1.1 | Tomato | cytosol | 4.6 | 42.75 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 4.06 | 42.62 |
| Solyc10g005920.2.1 | Tomato | plastid | 47.11 | 42.6 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 10.69 | 41.9 |
| KRH46495 | Soybean | cytosol | 19.58 | 40.75 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 3.82 | 18.77 |
Protein Annotations
| Gene3D:1.10.220.100 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | InterPro:EDC4_WD40 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF16529 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF6 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS7D01G221700 |
| EnsemblPlants:TraesCS7D01G221700.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr7D:+:182802581..182811776
Molecular Weight (calculated)
139404.0 Da
IEP (calculated)
6.241
GRAVY (calculated)
-0.407
Length
1282 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPSGNPNP NPNPNVPFEL SRLFKPPPNP NHPTTVPTPT GIFPGAPPGA PMVTGPPGPY SYPPATPPFH RNQYLNYPXD PNAVHLPVAA FANPNPAANP
0101: IPNHSPGPNP GARLMQLLGN TAPTHLESVV SMPPTSSEFS GGPVAPLPAM PSAPPARMTS TSSKMPRGRL LGPGDRAVHD VDSRLPGEAQ PPQLEVTPIT
0201: KYTSDPGLVL GRQIAVNRTY IVYGLKLGNI RVLNINTALR SLLRGHTQRV TDMAFFAEDV HRLASASVDG RIYVWKIDEG PDEENKPQIT GKIEMAIQIV
0301: GDAGTYHPRI CWHSHKQEIL FVGIGNCVLK IDTTKVGRGR DFSKEEPLKC SLDKLIDGVH LVGKHDGDVT DLSLSQWMTT RLASASKDGT VKIWDDRRTV
0401: PLSVMKPHDG KAVYSVSFLT APEQPNHINL VTAGPLNREV KIWASSDKEG WLLPSESETW RCTQTLELVS SLENRFEEAF FNQVAVLPQA SLILLANAKK
0501: NAIYAIHVEY GPDPASTRLD YIADFTVAMP ILSLTGTHES QPDGEHVVQV YCVQTMAIQQ YGLELSLCLP PTADNAGLGR DLAISHVYER PLEVASVESS
0601: TETKPLSDHQ GTEVDTATHV SSPTPSSNMD NAGSYAEAVL RRDASRGPSL GDHDGDKSSV DYSKKRMDSD GTSGQGAFDR KDCFGNEEPR GGQVDGVLPS
0701: AESTANGSPQ NAEMESKLVV EKKADQNIGF EDVKETQIVQ EKMERLNMSS EQTVETISER SVTTDKYSVE DSQRSDPTLL KQHSGARDEN LPRRTAEATE
0801: NINGSSSRNL QLPSPTKEEK VLHPQVSGQM SPLTSTFNST DSSHEHPSNT NPAIDSVPQV SAIQGKLQQL MAMHTDMQKQ LNTIVSAPIA KEGKRIETSL
0901: GRNIEKSIKA NVDAMWARIQ EENARHEKVE RERMQQISTL ITTSVNKDIP AILEKSLKRE ISLLGPTIAR TTTPIIEKSL SSAVSDSLQK VLGEKVANQL
1001: DKSISTKLEA TVAKQIQTQF HTSAKQALQD ALRSSFESSI IPAFEQSCKT MFEQVDGAFQ KGMSEHGTAI QQQVAAAHSP LAQTLRETIN SASSITQGLT
1101: SELLDGQRKL LALVASGNPI SHNTALQPIN GPIPNLPEAD VPLDPMKELT RLLSEQKIDE AFTMALQRSD VSMVSWLCSQ VDLQGLCRLN PVPLNQGVLL
1201: ALFQQLACDI ANDTPLKLQW MTAVAMAIQP THQMIAAHVR PIFEQVYGVL ARQQSVPGTS PLEANNIRLM MHVINSVMMT HK
0101: IPNHSPGPNP GARLMQLLGN TAPTHLESVV SMPPTSSEFS GGPVAPLPAM PSAPPARMTS TSSKMPRGRL LGPGDRAVHD VDSRLPGEAQ PPQLEVTPIT
0201: KYTSDPGLVL GRQIAVNRTY IVYGLKLGNI RVLNINTALR SLLRGHTQRV TDMAFFAEDV HRLASASVDG RIYVWKIDEG PDEENKPQIT GKIEMAIQIV
0301: GDAGTYHPRI CWHSHKQEIL FVGIGNCVLK IDTTKVGRGR DFSKEEPLKC SLDKLIDGVH LVGKHDGDVT DLSLSQWMTT RLASASKDGT VKIWDDRRTV
0401: PLSVMKPHDG KAVYSVSFLT APEQPNHINL VTAGPLNREV KIWASSDKEG WLLPSESETW RCTQTLELVS SLENRFEEAF FNQVAVLPQA SLILLANAKK
0501: NAIYAIHVEY GPDPASTRLD YIADFTVAMP ILSLTGTHES QPDGEHVVQV YCVQTMAIQQ YGLELSLCLP PTADNAGLGR DLAISHVYER PLEVASVESS
0601: TETKPLSDHQ GTEVDTATHV SSPTPSSNMD NAGSYAEAVL RRDASRGPSL GDHDGDKSSV DYSKKRMDSD GTSGQGAFDR KDCFGNEEPR GGQVDGVLPS
0701: AESTANGSPQ NAEMESKLVV EKKADQNIGF EDVKETQIVQ EKMERLNMSS EQTVETISER SVTTDKYSVE DSQRSDPTLL KQHSGARDEN LPRRTAEATE
0801: NINGSSSRNL QLPSPTKEEK VLHPQVSGQM SPLTSTFNST DSSHEHPSNT NPAIDSVPQV SAIQGKLQQL MAMHTDMQKQ LNTIVSAPIA KEGKRIETSL
0901: GRNIEKSIKA NVDAMWARIQ EENARHEKVE RERMQQISTL ITTSVNKDIP AILEKSLKRE ISLLGPTIAR TTTPIIEKSL SSAVSDSLQK VLGEKVANQL
1001: DKSISTKLEA TVAKQIQTQF HTSAKQALQD ALRSSFESSI IPAFEQSCKT MFEQVDGAFQ KGMSEHGTAI QQQVAAAHSP LAQTLRETIN SASSITQGLT
1101: SELLDGQRKL LALVASGNPI SHNTALQPIN GPIPNLPEAD VPLDPMKELT RLLSEQKIDE AFTMALQRSD VSMVSWLCSQ VDLQGLCRLN PVPLNQGVLL
1201: ALFQQLACDI ANDTPLKLQW MTAVAMAIQP THQMIAAHVR PIFEQVYGVL ARQQSVPGTS PLEANNIRLM MHVINSVMMT HK
0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
Arabidopsis Description
VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.