Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G127000.4 | Wheat | plastid | 86.16 | 52.83 |
| TraesCS7A01G220400.4 | Wheat | plastid | 84.91 | 52.1 |
| TraesCS7D01G221700.1 | Wheat | plastid | 82.79 | 51.79 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 20.57 | 42.53 |
| Os06t0300800-01 | Rice | plasma membrane | 69.95 | 42.05 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 63.59 | 36.74 |
| KRH46495 | Soybean | cytosol | 25.94 | 33.77 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 48.01 | 32.24 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 52.24 | 31.53 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 47.38 | 31.17 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 46.13 | 30.25 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 48.75 | 28.48 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 48.25 | 27.62 |
| KRH46493 | Soybean | plastid | 45.51 | 27.12 |
| CDY44010 | Canola | plastid | 40.9 | 26.47 |
| Bra034693.1-P | Field mustard | cytosol | 37.41 | 26.02 |
| KRH36660 | Soybean | endoplasmic reticulum | 45.64 | 26.01 |
| CDY23580 | Canola | plastid | 39.15 | 25.97 |
| AT3G13300.1 | Thale cress | cytosol | 43.39 | 25.89 |
| Solyc07g065950.2.1 | Tomato | plastid | 45.39 | 25.87 |
| KRH11647 | Soybean | endoplasmic reticulum | 44.89 | 25.62 |
| Solyc10g005920.2.1 | Tomato | plastid | 45.14 | 25.53 |
| CDY44011 | Canola | plastid | 40.77 | 25.47 |
| CDY23587 | Canola | plastid | 40.9 | 25.43 |
| AT3G13290.1 | Thale cress | cytosol | 42.39 | 25.37 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 41.27 | 24.89 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 7.73 | 23.75 |
| KRG98417 | Soybean | cytosol | 31.17 | 22.4 |
| Solyc02g005370.1.1 | Tomato | cytosol | 0.75 | 4.35 |
| Solyc11g039850.1.1 | Tomato | cytosol | 0.37 | 2.88 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 1.12 | 2.75 |
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 0.5 | 2.61 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 0.37 | 2.46 |
| Solyc07g021140.1.1 | Tomato | cytosol | 0.37 | 2.29 |
| Solyc03g071660.1.1 | Tomato | cytosol | 0.37 | 1.6 |
| Solyc09g055300.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc11g032180.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| KRH63269 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | UniProt:A0A287WAZ2 | InterPro:EDC4_WD40 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:HORVU7Hr1G045240 | EnsemblPlants:HORVU7Hr1G045240.3 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| PFAM:PF16529 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF6 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI000B47A038 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:142388913..142396892
Molecular Weight (calculated)
86513.3 Da
IEP (calculated)
6.321
GRAVY (calculated)
-0.389
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: LPLFPKSCQG SILRLPPLLP PSFYVFLLHP LPHLNPNRST SRSSGLSWRH PRETLTPTPA PLSSSAGSSS LPQTLTTPQP SRPPPASSRX YPPATPPFHR
101: NQYLHYPTDP NAAHLPVAAF ANPNPTANPL PNPGPGPNPG ARLMQLLGNT APAHLESVAS MPPTSSEFSG GPVAPLPGMP SAPPARMTST SSKMPRGRLL
201: GPGDRAVHDV DSRLPGEAQP PQLEVTPITK YTSDPGLVLG RQIAVNRTYI VYGLKLGNIR VLNINTALRS LLRGHTQRVT DMAFFAEDVH RLASASVDGR
301: IYVWKIDEGP DEENKPQITG KIEMAIQIVG DAGTYHPRIC WHSHKQEILF VGIGNCVLKI DTTKVGIGRD FSKEEPLKCS LDKLIDGVHL VGKHDGDVTD
401: LSLSQWMTTR LASASKDGTV KIWDDRRTVP LSVMKPHDGK AVYSVSFLTA PEQPNHINLV TAGPLNREVK IWASSDKEGW LLPSESETWR CTQTLELVSS
501: LENRFEEAFF NQVAVLPQAS LILLANAKKN AIYAIHVEYG PDPASTHLDY IADFTVAMPI LSLTGTHESQ PDGEHVVQVY CVQTMAIQQY GLELSLCLPP
601: TADNTGVGRD LAISHVYERP LEVASVESST ETKPLSDRQG TEADTATHVS SPTPTSNMDN AGSYAEAVLR RDASRGPSLG DHDGDKSSFD YSKKMMDSDV
701: TSGQGAFDRK DSFGNEEPRG GQVDGTVSDP HPTFKVGVNA THLITPSEII SGVLPSAEST ANGSPPNVEM ESKLVVEKKT DQNVGFEDVK ETQIAPPPPP
801: PA
101: NQYLHYPTDP NAAHLPVAAF ANPNPTANPL PNPGPGPNPG ARLMQLLGNT APAHLESVAS MPPTSSEFSG GPVAPLPGMP SAPPARMTST SSKMPRGRLL
201: GPGDRAVHDV DSRLPGEAQP PQLEVTPITK YTSDPGLVLG RQIAVNRTYI VYGLKLGNIR VLNINTALRS LLRGHTQRVT DMAFFAEDVH RLASASVDGR
301: IYVWKIDEGP DEENKPQITG KIEMAIQIVG DAGTYHPRIC WHSHKQEILF VGIGNCVLKI DTTKVGIGRD FSKEEPLKCS LDKLIDGVHL VGKHDGDVTD
401: LSLSQWMTTR LASASKDGTV KIWDDRRTVP LSVMKPHDGK AVYSVSFLTA PEQPNHINLV TAGPLNREVK IWASSDKEGW LLPSESETWR CTQTLELVSS
501: LENRFEEAFF NQVAVLPQAS LILLANAKKN AIYAIHVEYG PDPASTHLDY IADFTVAMPI LSLTGTHESQ PDGEHVVQVY CVQTMAIQQY GLELSLCLPP
601: TADNTGVGRD LAISHVYERP LEVASVESST ETKPLSDRQG TEADTATHVS SPTPTSNMDN AGSYAEAVLR RDASRGPSLG DHDGDKSSFD YSKKMMDSDV
701: TSGQGAFDRK DSFGNEEPRG GQVDGTVSDP HPTFKVGVNA THLITPSEII SGVLPSAEST ANGSPPNVEM ESKLVVEKKT DQNVGFEDVK ETQIAPPPPP
801: PA
0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
Arabidopsis Description
VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.