Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G221700.1 | Wheat | plastid | 96.18 | 98.13 |
| TraesCS7A01G220400.4 | Wheat | plastid | 97.71 | 97.78 |
| HORVU7Hr1G045240.3 | Barley | plastid | 52.83 | 86.16 |
| Os06t0300800-01 | Rice | plasma membrane | 77.37 | 75.86 |
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 7.42 | 63.4 |
| TraesCS6B01G314800.3 | Wheat | plastid | 65.14 | 62.83 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 51.99 | 56.95 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 50.84 | 54.37 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 50.23 | 53.9 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 54.59 | 53.72 |
| KRH63269 | Soybean | cytosol | 6.5 | 53.12 |
| Solyc03g071660.1.1 | Tomato | cytosol | 7.26 | 50.8 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 51.99 | 49.53 |
| Solyc07g021140.1.1 | Tomato | cytosol | 4.89 | 48.85 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 51.38 | 47.97 |
| KRH46493 | Soybean | plastid | 49.01 | 47.62 |
| CDY44010 | Canola | plastid | 44.27 | 46.73 |
| CDY23580 | Canola | plastid | 42.97 | 46.48 |
| KRH36660 | Soybean | endoplasmic reticulum | 49.92 | 46.41 |
| KRH11647 | Soybean | endoplasmic reticulum | 49.85 | 46.41 |
| KRG98417 | Soybean | cytosol | 39.45 | 46.24 |
| AT3G13300.1 | Thale cress | cytosol | 47.17 | 45.91 |
| Bra034693.1-P | Field mustard | cytosol | 40.29 | 45.71 |
| CDY23587 | Canola | plastid | 44.65 | 45.27 |
| AT3G13290.1 | Thale cress | cytosol | 46.1 | 45.0 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.06 | 44.94 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 13.23 | 44.59 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 45.34 | 44.59 |
| Solyc07g065950.2.1 | Tomato | plastid | 47.86 | 44.49 |
| CDY44011 | Canola | plastid | 43.35 | 44.16 |
| Solyc10g005920.2.1 | Tomato | plastid | 47.17 | 43.51 |
| Solyc11g032180.1.1 | Tomato | cytosol | 3.06 | 43.48 |
| Solyc11g039850.1.1 | Tomato | cytosol | 3.44 | 43.27 |
| Solyc02g005370.1.1 | Tomato | cytosol | 4.51 | 42.75 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 3.98 | 42.62 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 10.55 | 42.2 |
| KRH46495 | Soybean | cytosol | 19.34 | 41.07 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 4.74 | 23.75 |
Protein Annotations
| Gene3D:1.10.220.100 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | InterPro:EDC4_WD40 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF16529 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF6 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS7B01G127000 |
| EnsemblPlants:TraesCS7B01G127000.4 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:151323410..151331538
Molecular Weight (calculated)
142137.0 Da
IEP (calculated)
6.194
GRAVY (calculated)
-0.381
Length
1308 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPSGNPNP NPNVPFELSR LFKPPPNPNH LTTVPTPTGI FPGAPPGAPM ATGPPGPYSY PPATPPFHRN PYLNYPTDPN AVHLPVAAFA NPNPAANPIP
0101: NHSPGPNPGA RLMQLLGNTA PTHLESVVSM PPTSSEFSGG PVAPLPAMPS APPARMTSTS SKMPRGRLLG PGDRAVHDVD SRLPGEAQPP QLEVTPITKY
0201: TSDPGLVLGR QIAVNRTYIV YGLKLGNIRV LNINTALRSL LRGHTQRVTD MAFFAEDVHR LASASVDGRI YVWKIDEGPD EENKPQITGK IEMAIQIVGD
0301: AGTYHPRICW HSHKQEILFV GIGNCVLKID TTKVGRGRDF SKEEPLKCSL DKLIDGVHLV GKHDGDVTDL SLSQWMTTRL ASASKDGTVK IWDDRRTVPL
0401: SVMKPHDGKA VYSVSFLTAP EQPNHINLVT AGPLNREVKI WASSDKEGWL LPSESETWRC TQTLELVSSL ENRFEEAFFN QVAVLPQASL ILLANAKKNA
0501: IYAIHVEYGP DPASTRLDYI ADFTVAMPIL SLTGTHESQP DGEHVVQVYC VQTMAIQQYG LELSLCLPPT ADNAGLGRDL AISHVYERPL EVASVEPSTE
0601: TKPLSDHQGT EADTATHVSS PTPSSNLDNA GSYAEAVLRR DASRGPSLGD HDGDKSSFDY SKKRMDSDGT SGQGAFDRKD CFGNEEPRGG HVDGTVSDPH
0701: PTFKVGVNAT HLITPSEIIS GVLPSAESTA NGSPQNVEME SKLVVEEKAD QNIGFEDVKE TQIVQEKMER LNMSSEQTVQ TISERSVTTD KYSVEDSQRS
0801: DPTLLKQHSG ARDENLPRRT AEATENINGS SSRNLQLPSA TKEEKVLHPQ VSGQMSPITS TFNSTDSSHE HPSNTNPAID SVPQVAAIQG TLQQLMAMHT
0901: DMQKQLNAIV SAPIAKEGKR IETSLGRNIE KSIKANVDAM WARIQEENAR HEKVERERMQ QISTLITTSV NKDIPAILEK SLKREISLLG PTIARTTTPI
1001: IEKSLSSAVS DSLQKVLGEK VANQLDKSIS TKLEATVAKQ IQTQFHTSAK QALQDALRSS FESSIIPAFE QSCKTMFEQV DGAFQKGMSE HGTAIQQQVA
1101: AAHSPLAQTL RETINSASSI TQGLTSELLD GQRKLLALVA SGNPISHNTS ALQPINGPIP NLPEADVPLD PMKELTRLLS EQKFDEAFTM ALQRSDVSMV
1201: SWLCSQVDLQ GLCRLNPVPL NQGVLLALFQ QLACDIANDT PLKLQWMTAV AMAIQPTHQM IAAHVRPIFE QVYGVLARQQ SVPGTTPLEA NNIRLMMHVI
1301: NSVMMTHK
0101: NHSPGPNPGA RLMQLLGNTA PTHLESVVSM PPTSSEFSGG PVAPLPAMPS APPARMTSTS SKMPRGRLLG PGDRAVHDVD SRLPGEAQPP QLEVTPITKY
0201: TSDPGLVLGR QIAVNRTYIV YGLKLGNIRV LNINTALRSL LRGHTQRVTD MAFFAEDVHR LASASVDGRI YVWKIDEGPD EENKPQITGK IEMAIQIVGD
0301: AGTYHPRICW HSHKQEILFV GIGNCVLKID TTKVGRGRDF SKEEPLKCSL DKLIDGVHLV GKHDGDVTDL SLSQWMTTRL ASASKDGTVK IWDDRRTVPL
0401: SVMKPHDGKA VYSVSFLTAP EQPNHINLVT AGPLNREVKI WASSDKEGWL LPSESETWRC TQTLELVSSL ENRFEEAFFN QVAVLPQASL ILLANAKKNA
0501: IYAIHVEYGP DPASTRLDYI ADFTVAMPIL SLTGTHESQP DGEHVVQVYC VQTMAIQQYG LELSLCLPPT ADNAGLGRDL AISHVYERPL EVASVEPSTE
0601: TKPLSDHQGT EADTATHVSS PTPSSNLDNA GSYAEAVLRR DASRGPSLGD HDGDKSSFDY SKKRMDSDGT SGQGAFDRKD CFGNEEPRGG HVDGTVSDPH
0701: PTFKVGVNAT HLITPSEIIS GVLPSAESTA NGSPQNVEME SKLVVEEKAD QNIGFEDVKE TQIVQEKMER LNMSSEQTVQ TISERSVTTD KYSVEDSQRS
0801: DPTLLKQHSG ARDENLPRRT AEATENINGS SSRNLQLPSA TKEEKVLHPQ VSGQMSPITS TFNSTDSSHE HPSNTNPAID SVPQVAAIQG TLQQLMAMHT
0901: DMQKQLNAIV SAPIAKEGKR IETSLGRNIE KSIKANVDAM WARIQEENAR HEKVERERMQ QISTLITTSV NKDIPAILEK SLKREISLLG PTIARTTTPI
1001: IEKSLSSAVS DSLQKVLGEK VANQLDKSIS TKLEATVAKQ IQTQFHTSAK QALQDALRSS FESSIIPAFE QSCKTMFEQV DGAFQKGMSE HGTAIQQQVA
1101: AAHSPLAQTL RETINSASSI TQGLTSELLD GQRKLLALVA SGNPISHNTS ALQPINGPIP NLPEADVPLD PMKELTRLLS EQKFDEAFTM ALQRSDVSMV
1201: SWLCSQVDLQ GLCRLNPVPL NQGVLLALFQ QLACDIANDT PLKLQWMTAV AMAIQPTHQM IAAHVRPIFE QVYGVLARQQ SVPGTTPLEA NNIRLMMHVI
1301: NSVMMTHK
0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
Arabidopsis Description
VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.