Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 14.7 | 78.93 |
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 8.42 | 77.12 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 17.77 | 76.15 |
| KRG98417 | Soybean | cytosol | 52.61 | 66.04 |
| KRH46493 | Soybean | plastid | 62.95 | 65.53 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 63.95 | 65.26 |
| Solyc03g071660.1.1 | Tomato | cytosol | 8.71 | 65.24 |
| Solyc07g065950.2.1 | Tomato | plastid | 62.95 | 62.69 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 17.06 | 61.6 |
| Solyc10g005920.2.1 | Tomato | plastid | 61.81 | 61.07 |
| Solyc07g021140.1.1 | Tomato | cytosol | 5.71 | 61.07 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 50.32 | 59.05 |
| Zm00001d008821_P001 | Maize | extracellular | 5.92 | 58.45 |
| AT3G13300.1 | Thale cress | cytosol | 55.89 | 58.26 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 50.82 | 58.22 |
| CDY44010 | Canola | plastid | 51.11 | 57.79 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 49.68 | 57.1 |
| Solyc02g005370.1.1 | Tomato | cytosol | 5.57 | 56.52 |
| Bra034693.1-P | Field mustard | cytosol | 46.4 | 56.37 |
| AT3G13290.1 | Thale cress | cytosol | 53.75 | 56.19 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.57 | 56.18 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 52.96 | 55.79 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 4.85 | 55.74 |
| CDY23587 | Canola | plastid | 51.25 | 55.66 |
| CDY23580 | Canola | plastid | 47.82 | 55.42 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 52.32 | 55.15 |
| Solyc11g039850.1.1 | Tomato | cytosol | 4.07 | 54.81 |
| CDY44011 | Canola | plastid | 49.32 | 53.82 |
| Zm00001d048003_P001 | Maize | extracellular | 6.42 | 52.94 |
| EES05610 | Sorghum | plastid | 49.46 | 51.83 |
| Os02t0722800-01 | Rice | plasma membrane | 49.32 | 51.61 |
| TraesCS7B01G127000.4 | Wheat | plastid | 47.97 | 51.38 |
| TraesCS7A01G220400.4 | Wheat | plastid | 47.75 | 51.19 |
| TraesCS7D01G221700.1 | Wheat | plastid | 46.75 | 51.09 |
| Os06t0300800-01 | Rice | plasma membrane | 48.61 | 51.05 |
| Zm00001d017883_P002 | Maize | plastid | 49.04 | 50.29 |
| TraesCS6A01G286100.3 | Wheat | golgi | 45.11 | 49.88 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 45.97 | 48.75 |
| HORVU7Hr1G045240.3 | Barley | plastid | 27.62 | 48.25 |
| TraesCS6B01G314800.3 | Wheat | plastid | 46.61 | 48.16 |
| Zm00001d051678_P001 | Maize | cytosol | 46.82 | 47.3 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 46.82 | 47.26 |
| Zm00001d002560_P001 | Maize | mitochondrion | 13.85 | 40.76 |
Protein Annotations
| Gene3D:1.10.220.100 | EntrezGene:100259985 | wikigene:100259985 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | ProteinID:CCB62047 |
| ProteinID:CCB62047.1 | InterPro:EDC4_WD40 | UniProt:F6I592 | EMBL:FN596747 | GO:GO:0000932 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0031087 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | EntrezGene:LOC100259985 | wikigene:LOC100259985 | PFAM:PF16529 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF7 | SMART:SM00320 | SUPFAM:SSF50978 |
| TIGR:TC64730 | TIGR:TC70943 | UniParc:UPI0001985857 | ArrayExpress:VIT_19s0015g01380 | EnsemblPlantsGene:VIT_19s0015g01380 | EnsemblPlants:VIT_19s0015g01380.t01 |
| unigene:Vvi.5427 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | RefSeq:XP_002269575 |
| RefSeq:XP_002269575.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr19:-:9659293..9673344
Molecular Weight (calculated)
151438.0 Da
IEP (calculated)
5.529
GRAVY (calculated)
-0.263
Length
1401 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPGNPNQA AAFDMHKLFK PTSPSPQNPN NLNSSSPFPP SSYPPPPSAS YPPPSGPYSY PPQTSPFHHQ HHYHIPYPQE QLSNMHHQRS VSYPTPLLQP
0101: PPHHLAPPNP NPGARLMALL SPPTTNLDLT QQPAMPVAPI QQPASGVSEF AASPNVPILP SAPPPGIPNP AVVTASPVRM PSSKLPKGRR LVGENVVYDV
0201: DVRLQGEVQP QLEVTPITKY VSDPGLVLGR QIAVNKTYIC YGLKLGAIRV LNINTALRYL LRGHAQRVTD MAFFAEDVHL LASASINGRV YVWKISEGPD
0301: EEDKPQITGK IVIAIQIVGE GESVNPRVCW HCHKQEVLVV GIGKRILKID TTKVGKGESY SADEPLNCPV DKLIDGVQFI GKHDGEVTDL SMCQWMTTRL
0401: VSASTDGTIK IWEDRKTLPL LVLRPHDGHP VNSATFLTAP HRPDHIILIT AGPLNREVKL WATESEEGWL LPSDAESWHC TQTLDLKSSA EPCVEEAFFN
0501: QVLALSKSGL LLLANAKKNA IYAVHLEYGS NPAATCMDYI AEFTVTMPIL SFTGTSELLH GEHVVQVYCF QTQAIQQYAL NLSQCLPLLP ENVGVEKSDS
0601: GVSHDVTNAE GFGTLEPPGS KLTEMPLTSS ALKSTVLISS SESEPGVRFP VSSASIESAT LSPESKPGAL PLVNNDNDIV SIPSPPLPLS PRLSGKLSGF
0701: RSPTNNFEPG PTLGDRGDSD QVVIDYSVDR QIDTVCTTLS DLPSLDDDSR NDENKVAQDD SSTILNPTVM FKHPTHLITP SEIFMAVSSA EATHSTESKS
0801: EGEANIQDVS INSDVSNVEV EVKVVGETGS TQNDEFGLQG ESQNLALENK EKAFCSQASD LGIEMAKECS ALSSETYVVE ESRQVDGARM EALARPSNAG
0901: EDEVIDAIKD VSGKVADSAM PTTVPQSPAP TTKGKKHKGK NSQVSPSPTA FNSTDSSNEP GANLSSPSVE AAVPHILAMQ ETLNQLLSMQ KEMQKQISVL
1001: VAVPVTKEGR RLEATLGRSM EKSVKANADA LWANILEENA KHEKLVRDRT QQITSLITNS LNKDLPAILE KTVKKEMAAV VPAVARTITP VVEKTISSAI
1101: TETFQRGVGD KALNQVEKSI NSKLEATVAR QIQVQFQTSG KQALQDALKS NLEASVVPAF EMSCKAMFDQ VDSTFQKGMV EHATTVQQQF ESTHSPLALA
1201: LRDAINSASS MTQTLSGELA DGQRKLLALA AAGANPTSVN PLVTQLSNGP LGGLHDKVEM PLDPTKELSR LISERKYEEA FNGALQRSDV SIVSWLCSQV
1301: DLQGILSMVP LPLSQGVLLS LLQQLACDIN KDTPRKLGWM TDVAVVINPG DPMIAMHVRP IFDQVYQILN HHRSLPTTTS SQGQSIRLLM HVINSMLMTC
1401: K
0101: PPHHLAPPNP NPGARLMALL SPPTTNLDLT QQPAMPVAPI QQPASGVSEF AASPNVPILP SAPPPGIPNP AVVTASPVRM PSSKLPKGRR LVGENVVYDV
0201: DVRLQGEVQP QLEVTPITKY VSDPGLVLGR QIAVNKTYIC YGLKLGAIRV LNINTALRYL LRGHAQRVTD MAFFAEDVHL LASASINGRV YVWKISEGPD
0301: EEDKPQITGK IVIAIQIVGE GESVNPRVCW HCHKQEVLVV GIGKRILKID TTKVGKGESY SADEPLNCPV DKLIDGVQFI GKHDGEVTDL SMCQWMTTRL
0401: VSASTDGTIK IWEDRKTLPL LVLRPHDGHP VNSATFLTAP HRPDHIILIT AGPLNREVKL WATESEEGWL LPSDAESWHC TQTLDLKSSA EPCVEEAFFN
0501: QVLALSKSGL LLLANAKKNA IYAVHLEYGS NPAATCMDYI AEFTVTMPIL SFTGTSELLH GEHVVQVYCF QTQAIQQYAL NLSQCLPLLP ENVGVEKSDS
0601: GVSHDVTNAE GFGTLEPPGS KLTEMPLTSS ALKSTVLISS SESEPGVRFP VSSASIESAT LSPESKPGAL PLVNNDNDIV SIPSPPLPLS PRLSGKLSGF
0701: RSPTNNFEPG PTLGDRGDSD QVVIDYSVDR QIDTVCTTLS DLPSLDDDSR NDENKVAQDD SSTILNPTVM FKHPTHLITP SEIFMAVSSA EATHSTESKS
0801: EGEANIQDVS INSDVSNVEV EVKVVGETGS TQNDEFGLQG ESQNLALENK EKAFCSQASD LGIEMAKECS ALSSETYVVE ESRQVDGARM EALARPSNAG
0901: EDEVIDAIKD VSGKVADSAM PTTVPQSPAP TTKGKKHKGK NSQVSPSPTA FNSTDSSNEP GANLSSPSVE AAVPHILAMQ ETLNQLLSMQ KEMQKQISVL
1001: VAVPVTKEGR RLEATLGRSM EKSVKANADA LWANILEENA KHEKLVRDRT QQITSLITNS LNKDLPAILE KTVKKEMAAV VPAVARTITP VVEKTISSAI
1101: TETFQRGVGD KALNQVEKSI NSKLEATVAR QIQVQFQTSG KQALQDALKS NLEASVVPAF EMSCKAMFDQ VDSTFQKGMV EHATTVQQQF ESTHSPLALA
1201: LRDAINSASS MTQTLSGELA DGQRKLLALA AAGANPTSVN PLVTQLSNGP LGGLHDKVEM PLDPTKELSR LISERKYEEA FNGALQRSDV SIVSWLCSQV
1301: DLQGILSMVP LPLSQGVLLS LLQQLACDIN KDTPRKLGWM TDVAVVINPG DPMIAMHVRP IFDQVYQILN HHRSLPTTTS SQGQSIRLLM HVINSMLMTC
1401: K
0001: MASSPGNTNP HNTPPFDLGI LFKPSSNPYP PPAASYPPPT GPFLHNQYDQ QHYAPPGISA QPSPVTQQQQ DVSSSSAATN LHPQRTLSYP TPPLNLQSPR
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
Arabidopsis Description
VCSEnhancer of mRNA-decapping protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.