Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g055300.1.1 | Tomato | cytosol | 14.37 | 52.81 |
| Solyc03g071660.1.1 | Tomato | cytosol | 21.1 | 36.9 |
| Solyc02g005370.1.1 | Tomato | cytosol | 12.84 | 30.43 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 9.79 | 26.23 |
| Solyc07g021140.1.1 | Tomato | cytosol | 9.79 | 24.43 |
| Solyc11g039850.1.1 | Tomato | cytosol | 7.65 | 24.04 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 76.15 | 17.77 |
| KRG98417 | Soybean | cytosol | 53.21 | 15.59 |
| KRH46493 | Soybean | plastid | 54.74 | 13.3 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 49.24 | 13.16 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 54.74 | 13.04 |
| Solyc07g065950.2.1 | Tomato | plastid | 55.66 | 12.94 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 46.79 | 12.81 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 47.71 | 12.8 |
| Bra034693.1-P | Field mustard | cytosol | 44.95 | 12.75 |
| CDY23580 | Canola | plastid | 44.34 | 11.99 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 47.09 | 11.59 |
| CDY44011 | Canola | plastid | 45.26 | 11.53 |
| Solyc10g005920.2.1 | Tomato | plastid | 49.85 | 11.5 |
| CDY44010 | Canola | plastid | 41.28 | 10.9 |
| AT3G13300.1 | Thale cress | cytosol | 44.65 | 10.86 |
| TraesCS7D01G221700.1 | Wheat | plastid | 41.9 | 10.69 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 43.43 | 10.68 |
| AT3G13290.1 | Thale cress | cytosol | 43.73 | 10.67 |
| TraesCS7A01G220400.4 | Wheat | plastid | 42.2 | 10.56 |
| TraesCS7B01G127000.4 | Wheat | plastid | 42.2 | 10.55 |
| Os02t0722800-01 | Rice | plasma membrane | 43.12 | 10.53 |
| TraesCS6A01G286100.3 | Wheat | golgi | 40.37 | 10.42 |
| EES05610 | Sorghum | plastid | 42.51 | 10.4 |
| Os06t0300800-01 | Rice | plasma membrane | 41.59 | 10.19 |
| CDY23587 | Canola | plastid | 39.76 | 10.08 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 40.37 | 9.99 |
| Zm00001d017883_P002 | Maize | plastid | 41.28 | 9.88 |
| TraesCS6B01G314800.3 | Wheat | plastid | 40.37 | 9.73 |
| Zm00001d051678_P001 | Maize | cytosol | 41.28 | 9.73 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 39.76 | 9.37 |
| Zm00001d002560_P001 | Maize | mitochondrion | 12.23 | 8.4 |
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 1.22 | 2.61 |
| Zm00001d048003_P001 | Maize | extracellular | 1.22 | 2.35 |
| Zm00001d008821_P001 | Maize | extracellular | 0.92 | 2.11 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 1.83 | 1.55 |
| HORVU7Hr1G045240.3 | Barley | plastid | 2.75 | 1.12 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 0.61 | 0.77 |
Protein Annotations
| ArrayExpress:VIT_03s0091g01220 | EMBL:FN595242 | EnsemblPlants:VIT_03s0091g01220.t01 | EnsemblPlantsGene:VIT_03s0091g01220 | GO:GO:0000932 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0031087 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF7 | ProteinID:CCB47690 |
| ProteinID:CCB47690.1 | UniParc:UPI000210924B | UniProt:F6H690 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3:-:7888986..7890085
Molecular Weight (calculated)
35323.2 Da
IEP (calculated)
5.275
GRAVY (calculated)
-0.203
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKECSALSF ETYVVEESRQ VDGARMEALA QPSNAGVKEV IDAIKDVSGK VVDSAMPTTV PQSSAPTTKE KKYKGKNSEV SPSPTAFNTT DSSNEPGANL
101: SSPSVEAVVP HILAMQDTLN QLLSMQKEMQ KQISVLVVVL VTKEGRRLEI TSLITNSLNK DLPAILEKIV KKEIVAIVPT VARTITPIVE KTISSAIIET
201: FQRGVGDKAL NQVEKSINSK LEATVARKIQ VQFQTSGKQA LQDALKSNLE ASVVPAFEMS CKAMFDQVDS TFQKEWLSMT AIQQQFESTH SPLALALRDT
301: TSATNAVEDG EVSTRSGLIP TNTTSYS
101: SSPSVEAVVP HILAMQDTLN QLLSMQKEMQ KQISVLVVVL VTKEGRRLEI TSLITNSLNK DLPAILEKIV KKEIVAIVPT VARTITPIVE KTISSAIIET
201: FQRGVGDKAL NQVEKSINSK LEATVARKIQ VQFQTSGKQA LQDALKSNLE ASVVPAFEMS CKAMFDQVDS TFQKEWLSMT AIQQQFESTH SPLALALRDT
301: TSATNAVEDG EVSTRSGLIP TNTTSYS
0001: MASSPGPFLH NQYDQQHYAP PGISAQPSPV TQQQQDVSSS SAATNLHPQR TLSYPTPPLN LQSPRSNHNP GTHILALLNN TNNGAPVANQ EPSHQLPVVN
0101: HNEIARSFPG GSGPIRVPSC KLPKGRRLIG EHAVYDVDVR LQGEIQPQLE VTPITKYGSD PQLVVGRQIA VNKVYICYGL KGGNIRVLNI NTALRSLFRG
0201: HSQRVTDMAF FAEDVDMLAS VSLDGKVFVW KISEGSEGED QPQITGKIVL ALQILGEEDT KHPRVCWHCH KQEILVVSIG KHVLRIDTTK VGRGEVFSAE
0301: APLQCPLDKL IDGVQIVGKH DGEVTDLSMC QWMTTRLVSS SVDGTIKIWQ DRKAQPLVVL RPHDGHPVSS ATFVTSPERP DHIILITGGP LNREMKIWVS
0401: AGEEGWLLPA DAESWRCTQT LDLKSSTEPR AEEAFFNQVI ALSEAGLLLL ANAKRNALYA VHLDYGSSPV GTRMDYLSEF TVTMPILSFI GTNDPPEEPI
0501: VKVYCVQTLA IQQYTLDLCL CLPPPIENMG LEKSDSSVSR EANLVEGMSE PSGLKPTDLP SVDSVPKPSI IVNRSESANK LSFPSAEATS QAIVPPNGEP
0601: KTSGLPSQTS GAGSAYATLP QLPLSPRLSS KLSGYHTPVE AIEPVIPHHE LGGKTPSADY SVDRQMDAVG ERNLDVSSVE EISRSKDSNV TPDDDVSGMR
0701: SPSAFFKHPT HLVTPSEILM GVSSAEASIT TEDRRDRDAN IQDVNNDPRD TEVEVKEISE ARSTQNGEIN DHDETENCTS ENREKVFCSQ VSNLSTEMAR
0801: DCYPSTEGTF IPGESKAYGQ PIKAGDESGV DSRGGPAKLL KGKKQKAKNS QGPGLSSTSS NVANLADSFN EQSQSLSHPM TDLLPQLLAM QETMNQVMAS
0901: QKEMQRQLSN AATGPIGKES KRLEVALGRM IEKSSKSNAD ALWARIQEET VKNEKALRDH AQQIVNATTN FMSKELNAMF EKTIKKELAA IGPALARSVV
1001: PVIEKTVSSA ITESFQRGIG DKAVNQLDKS VNIKLEATVA RQIQAQFQTS GKQALQEGLR SSVESSVIPS FEKACKAMFD QIDSAFQKGI AEHTNAAQQR
1101: FDSGHSQLAH TLKESITSAS SVAQALSREL AETQRNLLAL AAAGANSGGS NSLVTQLSGG PLGALLEKVE APMDPTTELS RLISERKYEE SFTSALQRSD
1201: VSIVSWLCSQ VDLRGLLAMN PLPLSQGVLL SLLQQLACDI SKDTSRKLAW MTDVVAAINP SDQMIAVHAR PIFEQVYQIL HHHRNAPGSD VSAIRLIMHV
1301: INSMLMGCK
0101: HNEIARSFPG GSGPIRVPSC KLPKGRRLIG EHAVYDVDVR LQGEIQPQLE VTPITKYGSD PQLVVGRQIA VNKVYICYGL KGGNIRVLNI NTALRSLFRG
0201: HSQRVTDMAF FAEDVDMLAS VSLDGKVFVW KISEGSEGED QPQITGKIVL ALQILGEEDT KHPRVCWHCH KQEILVVSIG KHVLRIDTTK VGRGEVFSAE
0301: APLQCPLDKL IDGVQIVGKH DGEVTDLSMC QWMTTRLVSS SVDGTIKIWQ DRKAQPLVVL RPHDGHPVSS ATFVTSPERP DHIILITGGP LNREMKIWVS
0401: AGEEGWLLPA DAESWRCTQT LDLKSSTEPR AEEAFFNQVI ALSEAGLLLL ANAKRNALYA VHLDYGSSPV GTRMDYLSEF TVTMPILSFI GTNDPPEEPI
0501: VKVYCVQTLA IQQYTLDLCL CLPPPIENMG LEKSDSSVSR EANLVEGMSE PSGLKPTDLP SVDSVPKPSI IVNRSESANK LSFPSAEATS QAIVPPNGEP
0601: KTSGLPSQTS GAGSAYATLP QLPLSPRLSS KLSGYHTPVE AIEPVIPHHE LGGKTPSADY SVDRQMDAVG ERNLDVSSVE EISRSKDSNV TPDDDVSGMR
0701: SPSAFFKHPT HLVTPSEILM GVSSAEASIT TEDRRDRDAN IQDVNNDPRD TEVEVKEISE ARSTQNGEIN DHDETENCTS ENREKVFCSQ VSNLSTEMAR
0801: DCYPSTEGTF IPGESKAYGQ PIKAGDESGV DSRGGPAKLL KGKKQKAKNS QGPGLSSTSS NVANLADSFN EQSQSLSHPM TDLLPQLLAM QETMNQVMAS
0901: QKEMQRQLSN AATGPIGKES KRLEVALGRM IEKSSKSNAD ALWARIQEET VKNEKALRDH AQQIVNATTN FMSKELNAMF EKTIKKELAA IGPALARSVV
1001: PVIEKTVSSA ITESFQRGIG DKAVNQLDKS VNIKLEATVA RQIQAQFQTS GKQALQEGLR SSVESSVIPS FEKACKAMFD QIDSAFQKGI AEHTNAAQQR
1101: FDSGHSQLAH TLKESITSAS SVAQALSREL AETQRNLLAL AAAGANSGGS NSLVTQLSGG PLGALLEKVE APMDPTTELS RLISERKYEE SFTSALQRSD
1201: VSIVSWLCSQ VDLRGLLAMN PLPLSQGVLL SLLQQLACDI SKDTSRKLAW MTDVVAAINP SDQMIAVHAR PIFEQVYQIL HHHRNAPGSD VSAIRLIMHV
1301: INSMLMGCK
Arabidopsis Description
VCSEnhancer of mRNA-decapping protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.