Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 9.55 | 74.51 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 74.79 | 67.19 |
| Zm00001d008821_P001 | Maize | extracellular | 7.87 | 66.2 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 63.65 | 62.14 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 61.98 | 60.71 |
| Zm00001d048003_P001 | Maize | extracellular | 8.38 | 58.82 |
| Solyc03g071660.1.1 | Tomato | cytosol | 8.63 | 55.08 |
| KRH63269 | Soybean | cytosol | 7.29 | 54.38 |
| EES05610 | Sorghum | plastid | 59.8 | 53.4 |
| TraesCS6A01G286100.3 | Wheat | golgi | 56.2 | 52.96 |
| Os02t0722800-01 | Rice | plasma membrane | 59.38 | 52.95 |
| Os06t0300800-01 | Rice | plasma membrane | 58.12 | 52.02 |
| TraesCS7B01G127000.4 | Wheat | plastid | 56.95 | 51.99 |
| Solyc07g021140.1.1 | Tomato | cytosol | 5.7 | 51.91 |
| TraesCS7A01G220400.4 | Wheat | plastid | 56.7 | 51.8 |
| TraesCS7D01G221700.1 | Wheat | plastid | 55.53 | 51.72 |
| Zm00001d017883_P002 | Maize | plastid | 59.05 | 51.61 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 58.96 | 51.27 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.77 | 50.56 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 59.05 | 50.32 |
| KRG98417 | Soybean | cytosol | 46.73 | 50.0 |
| TraesCS6B01G314800.3 | Wheat | plastid | 56.62 | 49.85 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 55.11 | 49.81 |
| KRH46493 | Soybean | plastid | 54.94 | 48.74 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 56.45 | 48.56 |
| Zm00001d051678_P001 | Maize | cytosol | 55.95 | 48.16 |
| Bra034693.1-P | Field mustard | cytosol | 46.4 | 48.05 |
| HORVU7Hr1G045240.3 | Barley | plastid | 32.24 | 48.01 |
| Solyc11g039850.1.1 | Tomato | cytosol | 4.1 | 47.12 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 12.81 | 46.79 |
| Solyc11g032180.1.1 | Tomato | cytosol | 3.6 | 46.74 |
| CDY44010 | Canola | plastid | 48.24 | 46.49 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 15.08 | 46.39 |
| KRH11647 | Soybean | endoplasmic reticulum | 54.44 | 46.26 |
| CDY23580 | Canola | plastid | 46.82 | 46.24 |
| Solyc07g065950.2.1 | Tomato | plastid | 54.36 | 46.13 |
| KRH36660 | Soybean | endoplasmic reticulum | 54.27 | 46.06 |
| Solyc10g005920.2.1 | Tomato | plastid | 54.27 | 45.7 |
| Solyc02g005370.1.1 | Tomato | cytosol | 5.28 | 45.65 |
| AT3G13290.1 | Thale cress | cytosol | 50.92 | 45.37 |
| AT3G13300.1 | Thale cress | cytosol | 51.01 | 45.31 |
| Zm00001d002560_P001 | Maize | mitochondrion | 18.01 | 45.17 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 49.5 | 44.44 |
| CDY23587 | Canola | plastid | 47.91 | 44.34 |
| CDY44011 | Canola | plastid | 47.49 | 44.16 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 4.44 | 43.44 |
| KRH46495 | Soybean | cytosol | 22.03 | 42.69 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 5.28 | 24.14 |
Protein Annotations
| Gene3D:1.10.220.100 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | ncoils:Coil | InterPro:EDC4_WD40 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr3G10880_001 | EnsemblPlants:GSMUA_Achr3P10880_001 | EnsemblPlants:GSMUA_Achr3T10880_001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0SDK5 | PFAM:PF00400 | PFAM:PF16529 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF7 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000295DD56 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
WD domain, G-beta repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G10880_001]
Coordinates
chr3:+:8050985..8061043
Molecular Weight (calculated)
130310.0 Da
IEP (calculated)
5.285
GRAVY (calculated)
-0.268
Length
1194 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALLNPPAQL ESAVSMPPPS SAPSEFLAPS TAATAMLHPI PSAPPAALVQ SAPVRMPSNK LPRGRLLGAG ERTVYDVDLR LPGETQPPQL EVTPITKYIS
0101: DPGLVLGRQI AVNRNYICYG LKLGAIRVLN INTALRSLLK GHSQRVTDMA FFAEDVHLLA SASIDGRVFV WKIDEGPDTE NKPQITGKIV MAVQIVGEGE
0201: SCHPRICWHS HKQEILFVGI GYWVLKIDIN KVGRGKEFLA EEPIKCHVEK LIDGVQIIGK HDGEVTDLSI SQWMVTRLVS GSKDGTVRIW DDRKMVPLAM
0301: FKPHDGHPVN SVAFMTSPHR PDHINLITAG PLSREVKIWA SATEEGWLLP SDSESWHCTQ TLELKSSLEH RTEEAFFNQI VVLPQASLIV IANAKKNAIY
0401: AVHVDYGPYP ASTHMDYIAD FTVAMPILSL TATHDFLPDG EQVVQIYCVQ TQAIQQYALD LIQCLPPPTT NVGLVKDPLS RVFDTPTSVS SEATRTNELS
0501: ASSFEVQPSA PPLMKADADA LQVAPSSEAP SLGGCETDRS FSEYSDDRKV DSVVPSTFDV PMTKETTPKE ESKAGHSDLS KLSNPRMMFK LGGNSTHLIT
0601: PAEILSGAIP SSEGSRANQR IIEDAREGRS GQQELDSQKV PPDYPDENKE ISPETSLADF EVDNECSILT ENSFEEESHP GEDTAIPGSK KHLPSTVEEV
0701: PDDTKDTTEE VTGSAVTAAS QSLAADKGKK QKENKHQMLS PSSPSSSPFN STDALNEPGS SANVPSADAT FPQMPAMREM LNQIMSMQKE MQKQMGVMVA
0801: APIAKEGKRV ETMLSRSMEK IIKANADALW ARIQEENAKH EKFEKERMQQ MTNLITNYVN KDLPTILEKA LKKELSAIGS TVARAITPVI STTIAESFQR
0901: GVGDKTVNQL EKSMSSKLET AVARQIQTQF QTTGKQVLQD SLRSCLESSV VPAFDNSCKV MFEQVENAFQ KGMSEHTASA QQQLEAANTP LALTLREAIN
1001: SASSITQNLT TELIDGQRKL LALVAAGNTK ALSPLAMQQS NGSTPGLPEI VGAPVDPTKE LSRLISERKY EEAFTMALQR SDVSIVSWLC TQVDLRAICS
1101: TVPLPLSQGV LLALLQQLAC DLNNETSRKV GWMTDVAVAI NPTDPMITMH VRPIFEQVYS MLGHQRALPT TAASETTNIR LLMHVINSVL MTCK
0101: DPGLVLGRQI AVNRNYICYG LKLGAIRVLN INTALRSLLK GHSQRVTDMA FFAEDVHLLA SASIDGRVFV WKIDEGPDTE NKPQITGKIV MAVQIVGEGE
0201: SCHPRICWHS HKQEILFVGI GYWVLKIDIN KVGRGKEFLA EEPIKCHVEK LIDGVQIIGK HDGEVTDLSI SQWMVTRLVS GSKDGTVRIW DDRKMVPLAM
0301: FKPHDGHPVN SVAFMTSPHR PDHINLITAG PLSREVKIWA SATEEGWLLP SDSESWHCTQ TLELKSSLEH RTEEAFFNQI VVLPQASLIV IANAKKNAIY
0401: AVHVDYGPYP ASTHMDYIAD FTVAMPILSL TATHDFLPDG EQVVQIYCVQ TQAIQQYALD LIQCLPPPTT NVGLVKDPLS RVFDTPTSVS SEATRTNELS
0501: ASSFEVQPSA PPLMKADADA LQVAPSSEAP SLGGCETDRS FSEYSDDRKV DSVVPSTFDV PMTKETTPKE ESKAGHSDLS KLSNPRMMFK LGGNSTHLIT
0601: PAEILSGAIP SSEGSRANQR IIEDAREGRS GQQELDSQKV PPDYPDENKE ISPETSLADF EVDNECSILT ENSFEEESHP GEDTAIPGSK KHLPSTVEEV
0701: PDDTKDTTEE VTGSAVTAAS QSLAADKGKK QKENKHQMLS PSSPSSSPFN STDALNEPGS SANVPSADAT FPQMPAMREM LNQIMSMQKE MQKQMGVMVA
0801: APIAKEGKRV ETMLSRSMEK IIKANADALW ARIQEENAKH EKFEKERMQQ MTNLITNYVN KDLPTILEKA LKKELSAIGS TVARAITPVI STTIAESFQR
0901: GVGDKTVNQL EKSMSSKLET AVARQIQTQF QTTGKQVLQD SLRSCLESSV VPAFDNSCKV MFEQVENAFQ KGMSEHTASA QQQLEAANTP LALTLREAIN
1001: SASSITQNLT TELIDGQRKL LALVAAGNTK ALSPLAMQQS NGSTPGLPEI VGAPVDPTKE LSRLISERKY EEAFTMALQR SDVSIVSWLC TQVDLRAICS
1101: TVPLPLSQGV LLALLQQLAC DLNNETSRKV GWMTDVAVAI NPTDPMITMH VRPIFEQVYS MLGHQRALPT TAASETTNIR LLMHVINSVL MTCK
0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK
Arabidopsis Description
VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.