CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g032180.1.1	Tomato	cytosol	21.88	38.04
KRH36660	Soybean	endoplasmic reticulum	85.62	9.74
KRH11647	Soybean	endoplasmic reticulum	83.12	9.47
Zm00001d002560_P001	Maize	mitochondrion	25.0	8.4
KRG98417	Soybean	cytosol	57.5	8.24
GSMUA_Achr5P04250_001	Banana	plastid	57.5	7.52
GSMUA_Achr3P04200_001	Banana	plastid	55.62	7.3
GSMUA_Achr3P10880_001	Banana	plastid	54.38	7.29
VIT_00s0455g00020.t01	Wine grape	plastid	60.62	7.06
KRH46493	Soybean	plastid	58.12	6.91
GSMUA_Achr9P19760_001	Banana	plastid	56.88	6.85
Os02t0722800-01	Rice	plasma membrane	56.25	6.72
EES05610	Sorghum	plastid	55.62	6.66
TraesCS7D01G221700.1	Wheat	plastid	53.12	6.63
TraesCS7A01G220400.4	Wheat	plastid	53.12	6.5
TraesCS7B01G127000.4	Wheat	plastid	53.12	6.5
Os06t0300800-01	Rice	plasma membrane	53.12	6.37
Zm00001d017883_P002	Maize	plastid	54.38	6.37
TraesCS6A01G286100.3	Wheat	golgi	49.38	6.24
Zm00001d051678_P001	Maize	cytosol	53.75	6.2
TraesCS6D01G266500.2	Wheat	cytosol, plastid	48.75	5.9
TraesCS6B01G314800.3	Wheat	plastid	50.0	5.9
HORVU6Hr1G071910.3	Barley	cytosol, nucleus, plastid	49.38	5.69
Zm00001d048003_P001	Maize	extracellular	3.12	2.94
KRH46495	Soybean	cytosol	8.75	2.27
VIT_00s2472g00010.t01	Wine grape	cytosol, peroxisome	1.88	1.96
Zm00001d008821_P001	Maize	extracellular	1.25	1.41
VIT_00s1618g00010.t01	Wine grape	cytosol	1.25	0.52
HORVU7Hr1G045240.3	Barley	plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02002652	EnsemblPlants:KRH63269	EnsemblPlantsGene:GLYMA_04G164600	GO:GO:0000932	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0031087	PANTHER:PTHR15598	PANTHER:PTHR15598:SF7	ProteinID:KRH63269	ProteinID:KRH63269.1
SEG:seg	UniParc:UPI000295F034	UniProt:K7KKK6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr4:+:41086167..41089544

Molecular Weight (calculated)

17245.9 Da

IEP (calculated)

9.972

GRAVY (calculated)

0.036

Length

160 amino acids

Sequence
(BLAST)

001: MVSVLEKIIK KEISSIGTTI THLISQVIEK TISSAIAKSF QKGVGDKALN QLEKSISSKL EAIVARQIHA QFQTSSKQAL QEALKTSVEA SVVPTFEMSC
101: KALFDQIDIK FQNGLVKHTI DTINSASSIT QTLSGQLTDG QRKLLAIATN SKVATDPFVA

Best Arabidopsis Sequence Match ( AT3G13290.1 )
(BLAST)

0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK

Arabidopsis Description

VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.