Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G127000.4 | Wheat | plastid | 97.78 | 97.71 |
| TraesCS7D01G221700.1 | Wheat | plastid | 95.72 | 97.58 |
| HORVU7Hr1G045240.3 | Barley | plastid | 52.1 | 84.91 |
| Os06t0300800-01 | Rice | plasma membrane | 77.12 | 75.56 |
| TraesCS6A01G286100.3 | Wheat | golgi | 62.36 | 64.33 |
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 7.5 | 64.05 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 51.8 | 56.7 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 50.88 | 54.37 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 50.42 | 54.06 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 54.48 | 53.57 |
| KRH63269 | Soybean | cytosol | 6.5 | 53.12 |
| Solyc03g071660.1.1 | Tomato | cytosol | 7.27 | 50.8 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 52.1 | 49.6 |
| Solyc07g021140.1.1 | Tomato | cytosol | 4.9 | 48.85 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 51.19 | 47.75 |
| KRH46493 | Soybean | plastid | 49.12 | 47.7 |
| CDY44010 | Canola | plastid | 44.22 | 46.65 |
| CDY23580 | Canola | plastid | 43.0 | 46.48 |
| KRG98417 | Soybean | cytosol | 39.56 | 46.33 |
| KRH36660 | Soybean | endoplasmic reticulum | 49.66 | 46.13 |
| KRH11647 | Soybean | endoplasmic reticulum | 49.58 | 46.12 |
| AT3G13300.1 | Thale cress | cytosol | 47.21 | 45.91 |
| Bra034693.1-P | Field mustard | cytosol | 40.32 | 45.71 |
| CDY23587 | Canola | plastid | 44.68 | 45.27 |
| AT3G13290.1 | Thale cress | cytosol | 46.14 | 45.0 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.06 | 44.94 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 45.29 | 44.51 |
| Solyc07g065950.2.1 | Tomato | plastid | 47.74 | 44.35 |
| CDY44011 | Canola | plastid | 43.38 | 44.16 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 13.08 | 44.07 |
| Solyc11g032180.1.1 | Tomato | cytosol | 3.06 | 43.48 |
| Solyc10g005920.2.1 | Tomato | plastid | 46.98 | 43.3 |
| Solyc11g039850.1.1 | Tomato | cytosol | 3.44 | 43.27 |
| Solyc02g005370.1.1 | Tomato | cytosol | 4.51 | 42.75 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 3.98 | 42.62 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 10.56 | 42.2 |
| KRH46495 | Soybean | cytosol | 19.43 | 41.23 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 4.67 | 23.37 |
Protein Annotations
| Gene3D:1.10.220.100 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | InterPro:EDC4_WD40 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF16529 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF6 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS7A01G220400 |
| EnsemblPlants:TraesCS7A01G220400.4 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:188889325..188897727
Molecular Weight (calculated)
141895.0 Da
IEP (calculated)
6.225
GRAVY (calculated)
-0.391
Length
1307 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPSGNPNP NPNVPFELSR LFKPPPNPNH PTTVPTPAGI FPGGPPGAPM ATGPPGPYSY PPATPPFHRN PYLNYPTDPN AVHLPVAAFA NPNPTGNPIP
0101: NSNPGPNPGA RLMQLLGNTA PTHLESVVSM PPTSSEFSGG PVAPLPGMPS APPARMTSTS SKMPRGRLLG PGDRAVHDVD SRLPGEAQPP QLEVTPITKY
0201: TSDPGLVLGR QIAVNRTYIV YGLKLGNIRV LNINTALRSL LRGHTQRVTD MAFFAEDVHR LASASVDGRI YVWKIDEGPD EENKPQITGK IEMAIQIVGD
0301: AGTYHPRICW HSHKQEILFV GIGNCVLKID TTKVGRGRDF SKEEPLKCSL DKLIDGVHLV GKHDGDVTDL SLSQWMTTRL ASASKDGTVK IWDDRRTVPL
0401: SVMKPHDGKA VYSVSFLTAP EQPNHINLVT AGPLNREVKI WASSDKEGWL LPSESETWRC TQTLELVSSL ENRFEEAFFN QVAVLPQASL ILLANAKKNA
0501: IYAIHVEYGP DPASTRLDYI ADFTVAMPIL SLTGTHESQP DGEHVVQVYC VQTMAIQQYG LELLLCLPPT ADNAGLGRDL AISHAYERPL EVASVESSTE
0601: TKPLSDHQGT ADTATHVSSP TPSSNMDNAG SYAEAVLRRE ASRGPSLGDH DGDKSSFDYS KKRMDSDGTS GQGAFDRKDC FGNEEPRGGQ VDGTVSDPHP
0701: TFKVGVNATH LITPSEIISG VLPSAESTAN GSPQNVEMES KLVAEKKADQ NIGFEDVKET QIVQEKMERL NMSSEQTVET ISERSVTTDK YSVEDSQRSD
0801: PTLLKQHSGA RDENLPRRTA EATENINGSS SRNLQLPSAT KEEKVLHPQV SGQMSPLTST FNSTDSSHEH PSNTNPAIDS VPQVAAIQGT LQQLMAMHTD
0901: MQKQLNAIVS APIAKEGKRI ETSLGRNIEK SIKANVDAMW ARIQEENARH EKVERERMQQ ISTLITTSVN KDIPAILEKS LKREISLLGP TIARTTTPII
1001: EKSLSSAVSD SLQKVLGEKV ANQLDKSIST KLEATVAKQI QTQFHTSAKQ ALQDALRSSF ESSIIPAFEQ SCKTMFEQVD GAFQKGMSEH GTAIQQQVAA
1101: AHSPLAQTLR ETINSASSIT QGLTSELLDG QRKLLALVAS GNPISHNTSA LQPINGPIPN LPEADVPLDP MKELTRLLSE QKFDEAFTMA LQRSDVSMVS
1201: WLCSQVDLQG LCRLNPVPLN QGVLLALFQQ LACDIANDTP LKLQWMTAVA MAIQPTHQMI AAHVRPIFEQ VYGVLARQQS VPGTSPLEAN NIRLMMHVIN
1301: SVMMTHK
0101: NSNPGPNPGA RLMQLLGNTA PTHLESVVSM PPTSSEFSGG PVAPLPGMPS APPARMTSTS SKMPRGRLLG PGDRAVHDVD SRLPGEAQPP QLEVTPITKY
0201: TSDPGLVLGR QIAVNRTYIV YGLKLGNIRV LNINTALRSL LRGHTQRVTD MAFFAEDVHR LASASVDGRI YVWKIDEGPD EENKPQITGK IEMAIQIVGD
0301: AGTYHPRICW HSHKQEILFV GIGNCVLKID TTKVGRGRDF SKEEPLKCSL DKLIDGVHLV GKHDGDVTDL SLSQWMTTRL ASASKDGTVK IWDDRRTVPL
0401: SVMKPHDGKA VYSVSFLTAP EQPNHINLVT AGPLNREVKI WASSDKEGWL LPSESETWRC TQTLELVSSL ENRFEEAFFN QVAVLPQASL ILLANAKKNA
0501: IYAIHVEYGP DPASTRLDYI ADFTVAMPIL SLTGTHESQP DGEHVVQVYC VQTMAIQQYG LELLLCLPPT ADNAGLGRDL AISHAYERPL EVASVESSTE
0601: TKPLSDHQGT ADTATHVSSP TPSSNMDNAG SYAEAVLRRE ASRGPSLGDH DGDKSSFDYS KKRMDSDGTS GQGAFDRKDC FGNEEPRGGQ VDGTVSDPHP
0701: TFKVGVNATH LITPSEIISG VLPSAESTAN GSPQNVEMES KLVAEKKADQ NIGFEDVKET QIVQEKMERL NMSSEQTVET ISERSVTTDK YSVEDSQRSD
0801: PTLLKQHSGA RDENLPRRTA EATENINGSS SRNLQLPSAT KEEKVLHPQV SGQMSPLTST FNSTDSSHEH PSNTNPAIDS VPQVAAIQGT LQQLMAMHTD
0901: MQKQLNAIVS APIAKEGKRI ETSLGRNIEK SIKANVDAMW ARIQEENARH EKVERERMQQ ISTLITTSVN KDIPAILEKS LKREISLLGP TIARTTTPII
1001: EKSLSSAVSD SLQKVLGEKV ANQLDKSIST KLEATVAKQI QTQFHTSAKQ ALQDALRSSF ESSIIPAFEQ SCKTMFEQVD GAFQKGMSEH GTAIQQQVAA
1101: AHSPLAQTLR ETINSASSIT QGLTSELLDG QRKLLALVAS GNPISHNTSA LQPINGPIPN LPEADVPLDP MKELTRLLSE QKFDEAFTMA LQRSDVSMVS
1201: WLCSQVDLQG LCRLNPVPLN QGVLLALFQQ LACDIANDTP LKLQWMTAVA MAIQPTHQMI AAHVRPIFEQ VYGVLARQQS VPGTSPLEAN NIRLMMHVIN
1301: SVMMTHK
0001: MASSPGNTNP HNTPPFDLGI LFKPSSNPYP PPAASYPPPT GPFLHNQYDQ QHYAPPGISA QPSPVTQQQQ DVSSSSAATN LHPQRTLSYP TPPLNLQSPR
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
Arabidopsis Description
VCSEnhancer of mRNA-decapping protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.