Factsheet for Solyc02g005370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 2
cytosol 3
mitochondrion 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g062490.1.1	Tomato	nucleus, plastid	52.17	59.02
Solyc07g021140.1.1	Tomato	cytosol	53.62	56.49
Solyc11g039850.1.1	Tomato	cytosol	39.86	52.88
Solyc03g071660.1.1	Tomato	cytosol	68.84	50.8
Solyc09g055300.1.1	Tomato	cytosol	24.64	38.2
Solyc11g032180.1.1	Tomato	cytosol	23.19	34.78
VIT_03s0091g01220.t01	Wine grape	cytosol	30.43	12.84
Zm00001d002560_P001	Maize	mitochondrion	28.26	8.19
Solyc07g065950.2.1	Tomato	plastid	75.36	7.39
KRG98417	Soybean	cytosol	47.83	5.91
VIT_19s0015g01380.t01	Wine grape	plastid	56.52	5.57
Solyc10g005920.2.1	Tomato	plastid	55.8	5.43
GSMUA_Achr3P10880_001	Banana	plastid	45.65	5.28
CDY44010	Canola	plastid	46.38	5.17
GSMUA_Achr5P04250_001	Banana	plastid	45.65	5.15
AT3G13290.1	Thale cress	cytosol	49.28	5.07
GSMUA_Achr3P04200_001	Banana	plastid	44.2	5.0
KRH46493	Soybean	plastid	48.55	4.98
AT3G13300.1	Thale cress	cytosol	47.1	4.84
CDY23587	Canola	plastid	44.93	4.81
GSMUA_Achr9P19760_001	Banana	plastid	45.65	4.74
Bra034692.1-P	Field mustard	cytosol, plastid	45.65	4.74
TraesCS7D01G221700.1	Wheat	plastid	42.75	4.6
TraesCS7A01G220400.4	Wheat	plastid	42.75	4.51
TraesCS7B01G127000.4	Wheat	plastid	42.75	4.51
TraesCS6A01G286100.3	Wheat	golgi	41.3	4.5
TraesCS6D01G266500.2	Wheat	cytosol, plastid	42.03	4.39
CDY23580	Canola	plastid	38.41	4.38
TraesCS6B01G314800.3	Wheat	plastid	42.75	4.35
Bra034693.1-P	Field mustard	cytosol	36.23	4.34
EES05610	Sorghum	plastid	41.3	4.26
Os06t0300800-01	Rice	plasma membrane	40.58	4.2
Os02t0722800-01	Rice	plasma membrane	40.58	4.18
Zm00001d017883_P002	Maize	plastid	41.3	4.17
Zm00001d051678_P001	Maize	cytosol	41.3	4.11
HORVU6Hr1G071910.3	Barley	cytosol, nucleus, plastid	41.3	4.11
CDY44011	Canola	plastid	36.23	3.89
Zm00001d048003_P001	Maize	extracellular	2.17	1.76
VIT_03s0091g01230.t01	Wine grape	nucleus	1.45	0.77
HORVU7Hr1G045240.3	Barley	plastid	4.35	0.75
Zm00001d008821_P001	Maize	extracellular	0.72	0.7

Protein Annotations

EnsemblPlants:Solyc02g005370.1.1	EnsemblPlantsGene:Solyc02g005370.1	GO:GO:0000932	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0031087	PANTHER:PTHR15598	PANTHER:PTHR15598:SF7	UniParc:UPI0002767E92	UniProt:K4B4D9	MapMan:35.1

Description

No Description!

Coordinates

chr2:-:8330557..8331062

Molecular Weight (calculated)

15219.1 Da

IEP (calculated)

7.073

GRAVY (calculated)

-0.318

Length

138 amino acids

Sequence
(BLAST)

001: MVFKIVCDKA VNQLEKALNS KLEATIAIQI QALFEHVNST FNKVIVDHTG ATQQQFDSVN SPLAIAPRDA INPALAMTQT TSREFTDSQR QLLSLIVSGG
101: NFQSTNQLNH INNGSLLHQK IETPPDPTKE ISRKLGEH

Best Arabidopsis Sequence Match ( AT3G13290.1 )
(BLAST)

0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK

Arabidopsis Description

VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.