Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05610 | Sorghum | plastid | 91.22 | 93.19 |
| Zm00001d051678_P001 | Maize | cytosol | 85.29 | 83.99 |
| Zm00001d008821_P001 | Maize | extracellular | 8.64 | 83.1 |
| Os02t0722800-01 | Rice | plasma membrane | 72.84 | 74.31 |
| TraesCS6A01G286100.3 | Wheat | golgi | 68.74 | 74.11 |
| TraesCS6B01G314800.3 | Wheat | plastid | 71.23 | 71.76 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 69.25 | 71.61 |
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 7.91 | 70.59 |
| Zm00001d048003_P001 | Maize | extracellular | 8.71 | 70.0 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 70.86 | 69.74 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 51.61 | 59.05 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 50.66 | 56.77 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 50.37 | 56.26 |
| Zm00001d002560_P001 | Maize | mitochondrion | 19.55 | 56.09 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 54.25 | 55.76 |
| KRH63269 | Soybean | cytosol | 6.37 | 54.38 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 51.9 | 51.64 |
| CDY44010 | Canola | plastid | 44.73 | 49.31 |
| Solyc03g071660.1.1 | Tomato | cytosol | 6.73 | 49.2 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 50.29 | 49.04 |
| KRH46493 | Soybean | plastid | 48.1 | 48.81 |
| KRG98417 | Soybean | cytosol | 39.24 | 48.03 |
| CDY23587 | Canola | plastid | 45.1 | 47.75 |
| Bra034693.1-P | Field mustard | cytosol | 39.97 | 47.35 |
| CDY23580 | Canola | plastid | 41.51 | 46.9 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 45.61 | 46.84 |
| KRH11647 | Soybean | endoplasmic reticulum | 48.17 | 46.83 |
| AT3G13300.1 | Thale cress | cytosol | 45.83 | 46.58 |
| Solyc07g021140.1.1 | Tomato | cytosol | 4.47 | 46.56 |
| KRH36660 | Soybean | endoplasmic reticulum | 47.88 | 46.48 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 13.1 | 46.13 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.0 | 46.07 |
| AT3G13290.1 | Thale cress | cytosol | 45.1 | 45.97 |
| Solyc11g032180.1.1 | Tomato | cytosol | 3.07 | 45.65 |
| Solyc07g065950.2.1 | Tomato | plastid | 46.71 | 45.34 |
| CDY44011 | Canola | plastid | 42.61 | 45.33 |
| Solyc10g005920.2.1 | Tomato | plastid | 45.53 | 43.86 |
| KRH46495 | Soybean | cytosol | 19.18 | 42.53 |
| Solyc02g005370.1.1 | Tomato | cytosol | 4.17 | 41.3 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 9.88 | 41.28 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 3.51 | 39.34 |
| Solyc11g039850.1.1 | Tomato | cytosol | 2.93 | 38.46 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 5.56 | 29.12 |
Protein Annotations
| Gene3D:1.10.220.100 | EntrezGene:103627664 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | UniProt:A0A1D6HIT9 | ProteinID:AQK74415.1 |
| ProteinID:AQK74423.1 | ProteinID:AQK74430.1 | ncoils:Coil | InterPro:EDC4_WD40 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF16529 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR15598 | PANTHER:PTHR15598:SF6 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000844243E |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | EnsemblPlantsGene:Zm00001d017883 | EnsemblPlants:Zm00001d017883_P002 |
| EnsemblPlants:Zm00001d017883_T002 | SEG:seg | : | : | : | : |
Description
Enhancer of mRNA-decapping protein 4
Coordinates
chr5:-:209534213..209545337
Molecular Weight (calculated)
148654.0 Da
IEP (calculated)
5.583
GRAVY (calculated)
-0.357
Length
1366 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPSGNPNP NPNTPFEIGK LFRPPNPMTT ATPNPIFPGV AGGPTGSPPP SGPYSYPPVT PPFHRGPYIH YQQDPHAMAR PVVSFPMPNP NLNPNPNPNA
0101: NPNAASPGPN PGARLMQLLG NSGPTQLETA VSMPPPTSEF AQLQQLPAMP SAPPARMLSS TSSKVPRGRL LGTGERAVHD VDSRLPGEAQ PPQLEVTPIT
0201: KYTSDPGLVL GRQIAVNRTY IVYGLKLGNI RVLNINTALR ALLRGHTQRV TDMAFFAEDV HRLASASIDG RIYVWRIDEG PDEENKPQIT GKIEIAIQIV
0301: GEAEAYHPRI CWHSHKQEIL FVGIGNCVLR IDTTKVGRGK DFTVEDPVKC HLEKLVDGVR LVGKHDGDVT DLSISQWMST RLASGSKDGS VKIWDDRKQV
0401: PLSIFKPHDG QAVYSVAFLT APERPNHINL ITAGLLNREV KIWASTNEDG WLLPSDSETW KCTQTLELVS SLEPRVEEAF FNQVAVLPQA SLILLANAKK
0501: NAIYAVHVEY GPDPASTRLD YIADFTVAMP ILSLTGTHDS QPDSEQVVQV YCVQTMAIQQ YGLELPLCLP PTADSTGFGR DPAISRVYEA PLEMAGTESS
0601: TGTSFTDSYS VSSLSKPSTV DQSAGNAVAF SYLILSVNSE IVIPRDLSAE LDLKPSAPPL AYSEGDGSVP LPSAPPAPKM EAPGSGPAPG GRGIDQSAFD
0701: YTTNRNVERD VLKRQDTPMP IRKDILGKDE PRDGHSDVPM LPNPRLMFQV GGNATHLVTP SEIISGTLSS SENNDASKSD GGKSQDVSSR SSQVPEVEPK
0801: HIDESKQDQN LGLEAVKETQ IVCENMEKTR SSLDQTVEMI SERSVTTDKY SVEESQSSSD RPTSDQTGIS ENVLKKFVEM PEKIDYSSAS REQSSSFTKE
0901: EKVLHPQTSG QPSPPVSAFN STESHEPLSS TYLPITVSSY PEVGATQGML QQLMGRQEDM EKQLSTVVPA SIAKEGKRLE TSLGRTVEKS IKANIDAFWA
1001: RLQEENTKRE KADRDRMQQF VTLITSSINK DLPSNLEKSL KKEISSLGPV VARAITPIIE KCLTSAVSDS VQKGLGDKLF NQLEKSITGK LEATLARQIQ
1101: IQFHTSGKQA LQDALRTSFE SLLVPAFEQA CKTMFEQIDG AFQKGMSEHS TAIQHQVESS HSPLALTLKE IINSASSITQ SFSSELLDGN RKLLALVTSG
1201: NAMAHNTSAL QPINGPMGGS QEVEAPLDPM KELGRLISER KFDEAFTMAL QRSDVSIVSW LCSQVDLRAL CAMVPVPLNQ GVLLALLQQL AIDIHNETSR
1301: KVQWMTDVAM AINPADQMIA VHVRPIFEQV YNQLAHQRTL PTMTAADGTS IRVIMHVINS VLLSYK
0101: NPNAASPGPN PGARLMQLLG NSGPTQLETA VSMPPPTSEF AQLQQLPAMP SAPPARMLSS TSSKVPRGRL LGTGERAVHD VDSRLPGEAQ PPQLEVTPIT
0201: KYTSDPGLVL GRQIAVNRTY IVYGLKLGNI RVLNINTALR ALLRGHTQRV TDMAFFAEDV HRLASASIDG RIYVWRIDEG PDEENKPQIT GKIEIAIQIV
0301: GEAEAYHPRI CWHSHKQEIL FVGIGNCVLR IDTTKVGRGK DFTVEDPVKC HLEKLVDGVR LVGKHDGDVT DLSISQWMST RLASGSKDGS VKIWDDRKQV
0401: PLSIFKPHDG QAVYSVAFLT APERPNHINL ITAGLLNREV KIWASTNEDG WLLPSDSETW KCTQTLELVS SLEPRVEEAF FNQVAVLPQA SLILLANAKK
0501: NAIYAVHVEY GPDPASTRLD YIADFTVAMP ILSLTGTHDS QPDSEQVVQV YCVQTMAIQQ YGLELPLCLP PTADSTGFGR DPAISRVYEA PLEMAGTESS
0601: TGTSFTDSYS VSSLSKPSTV DQSAGNAVAF SYLILSVNSE IVIPRDLSAE LDLKPSAPPL AYSEGDGSVP LPSAPPAPKM EAPGSGPAPG GRGIDQSAFD
0701: YTTNRNVERD VLKRQDTPMP IRKDILGKDE PRDGHSDVPM LPNPRLMFQV GGNATHLVTP SEIISGTLSS SENNDASKSD GGKSQDVSSR SSQVPEVEPK
0801: HIDESKQDQN LGLEAVKETQ IVCENMEKTR SSLDQTVEMI SERSVTTDKY SVEESQSSSD RPTSDQTGIS ENVLKKFVEM PEKIDYSSAS REQSSSFTKE
0901: EKVLHPQTSG QPSPPVSAFN STESHEPLSS TYLPITVSSY PEVGATQGML QQLMGRQEDM EKQLSTVVPA SIAKEGKRLE TSLGRTVEKS IKANIDAFWA
1001: RLQEENTKRE KADRDRMQQF VTLITSSINK DLPSNLEKSL KKEISSLGPV VARAITPIIE KCLTSAVSDS VQKGLGDKLF NQLEKSITGK LEATLARQIQ
1101: IQFHTSGKQA LQDALRTSFE SLLVPAFEQA CKTMFEQIDG AFQKGMSEHS TAIQHQVESS HSPLALTLKE IINSASSITQ SFSSELLDGN RKLLALVTSG
1201: NAMAHNTSAL QPINGPMGGS QEVEAPLDPM KELGRLISER KFDEAFTMAL QRSDVSIVSW LCSQVDLRAL CAMVPVPLNQ GVLLALLQQL AIDIHNETSR
1301: KVQWMTDVAM AINPADQMIA VHVRPIFEQV YNQLAHQRTL PTMTAADGTS IRVIMHVINS VLLSYK
0001: MASSPGNTNP HNTPPFDLGI LFKPSSNPYP PPAASYPPPT GPFLHNQYDQ QHYAPPGISA QPSPVTQQQQ DVSSSSAATN LHPQRTLSYP TPPLNLQSPR
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
Arabidopsis Description
VCSEnhancer of mRNA-decapping protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.