Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s2472g00010.t01 | Wine grape | cytosol, peroxisome | 8.61 | 68.63 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 68.17 | 67.95 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 60.71 | 61.98 |
| Zm00001d008821_P001 | Maize | extracellular | 7.14 | 61.27 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 63.49 | 58.24 |
| KRH63269 | Soybean | cytosol | 7.3 | 55.62 |
| Solyc03g071660.1.1 | Tomato | cytosol | 8.37 | 54.55 |
| Zm00001d048003_P001 | Maize | extracellular | 7.47 | 53.53 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.86 | 52.81 |
| EES05610 | Sorghum | plastid | 57.42 | 52.36 |
| VIT_00s0455g00020.t01 | Wine grape | plastid | 57.83 | 51.35 |
| TraesCS7D01G221700.1 | Wheat | plastid | 53.81 | 51.17 |
| Os02t0722800-01 | Rice | plasma membrane | 55.7 | 50.71 |
| Zm00001d017883_P002 | Maize | plastid | 56.77 | 50.66 |
| TraesCS7A01G220400.4 | Wheat | plastid | 54.06 | 50.42 |
| TraesCS7B01G127000.4 | Wheat | plastid | 53.9 | 50.23 |
| Os06t0300800-01 | Rice | plasma membrane | 54.88 | 50.15 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 54.31 | 50.11 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 57.1 | 49.68 |
| TraesCS6A01G286100.3 | Wheat | golgi | 51.6 | 49.64 |
| Solyc11g032180.1.1 | Tomato | cytosol | 3.69 | 48.91 |
| Solyc07g021140.1.1 | Tomato | cytosol | 5.25 | 48.85 |
| KRH46493 | Soybean | plastid | 53.08 | 48.07 |
| TraesCS6B01G314800.3 | Wheat | plastid | 53.4 | 48.01 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 12.8 | 47.71 |
| CDY44010 | Canola | plastid | 48.32 | 47.54 |
| KRG98417 | Soybean | cytosol | 43.48 | 47.49 |
| HORVU7Hr1G045240.3 | Barley | plastid | 31.17 | 47.38 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 53.81 | 47.26 |
| Zm00001d051678_P001 | Maize | cytosol | 53.4 | 46.94 |
| Bra034693.1-P | Field mustard | cytosol | 44.05 | 46.57 |
| CDY23580 | Canola | plastid | 45.86 | 46.24 |
| KRH11647 | Soybean | endoplasmic reticulum | 53.24 | 46.19 |
| KRH36660 | Soybean | endoplasmic reticulum | 53.24 | 46.13 |
| VIT_00s1618g00010.t01 | Wine grape | cytosol | 14.6 | 45.88 |
| Solyc07g065950.2.1 | Tomato | plastid | 52.75 | 45.7 |
| AT3G13290.1 | Thale cress | cytosol | 49.96 | 45.45 |
| AT3G13300.1 | Thale cress | cytosol | 49.88 | 45.24 |
| Bra034692.1-P | Field mustard | cytosol, plastid | 49.14 | 45.04 |
| CDY23587 | Canola | plastid | 47.58 | 44.96 |
| Solyc10g005920.2.1 | Tomato | plastid | 52.01 | 44.71 |
| CDY44011 | Canola | plastid | 46.84 | 44.47 |
| Solyc11g039850.1.1 | Tomato | cytosol | 3.77 | 44.23 |
| Solyc02g005370.1.1 | Tomato | cytosol | 5.0 | 44.2 |
| Zm00001d002560_P001 | Maize | mitochondrion | 16.82 | 43.07 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 4.18 | 41.8 |
| KRH46495 | Soybean | cytosol | 20.34 | 40.26 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 3.77 | 17.62 |
Protein Annotations
| Gene3D:1.10.220.100 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | ncoils:Coil | InterPro:EDC4_WD40 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr3G04200_001 | EnsemblPlants:GSMUA_Achr3P04200_001 | EnsemblPlants:GSMUA_Achr3T04200_001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0SBN8 | PFAM:PF16529 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR15598 | PANTHER:PTHR15598:SF7 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0002950048 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
WD domain, G-beta repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G04200_001]
Coordinates
chr3:-:2676770..2686641
Molecular Weight (calculated)
133216.0 Da
IEP (calculated)
6.435
GRAVY (calculated)
-0.250
Length
1219 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPAGNPNL FRPPNANPIT GPSPFPQPSS YPPPPPSYPS PPPHGAFSYP PTTSPFHRHP FLLYPPDTLH RPAIAHAAAG THPPNPNSVP STSPNPISNN
0101: NPGARLMALL NPPTSQFESA VSMPAPSTMP LELSPPANAV ALRSAPFTLA VVQPVPARLP SSKQPRGRLL GGGHTCAYDV DSRLLGESQP PQLEVTPITK
0201: YTSDPGLVLG RQIAVNRTYI CYGLKLGAIR VLNINTALRS LLKGHSQRVT DMTFFAEDVH LLASASIDGR VFVWKIDEVP DEENKPQITE KKIIAVQIVG
0301: NGESYHPRIC WHSHKQEFLF VGIGNRVLKI DLIRIGRGKE FSAEEPLKCP AEKLIDGIQL VGKHDGDVTD LSISQWMITR LVSASKDGTV KIWEDRKAVP
0401: LATLRPHDGE PVNSVAFMAS PHRPDHINLV TAGPLNREVK LWASTSEEGW LLPGDSESWQ CTQTLDLRSS LEPHLEDAFF NQIVVLPQAN LIVIANAKKN
0501: AIYAVHVDYG PCPASTHMDY IADFTVTMPI LSLTGTNDFL ADGEQVVQIY CVQTQAIQQY AMELNQCLPP PTANAQAFHG PPVMKVPELS TSKPEAKTDV
0601: PPLAEKDIDV QYVSSSVPVN LDLAGRLAGL SGPRKAEHGS PLVNNVVDHP KVQVLDTIIN NNIKSQEVEV KVAGKGRSGQ KEDFDTHKVP QSVTIEDKER
0701: PFQTLEATLG VDHESSMPPS TLKVDVEYKK RDMPEKESDV TAIPQSLSVA KGKKQKGKEH HMTDLSSPSL SPFDSNDSLN EPERSSVVPS TDAVIPQILA
0801: LQETLNQLMN MQKEMQKQMG VMLAAPIVNE GKRLETALGG CMEKAIKENA DVLWAHFQEE NWKHERVAKD QMQQLTNLIT NVMNRDLPVM LERTLKKEIS
0901: AVGPTVARAI TPVISSVITE LFQKGVGDKA VNQLEKSITA KLEATMSRQI QTQFQTSGKQ VLQDALRSCV ESSVVPAFEK SCKTMFEQVD SAFQKGMNEH
1001: TAAAQQQLEA AYTPLALTLR DAINSTSSIT QNLTTELIDG QRKLVALVAA GNTKAANPIS MQQTGAPMPG LPEMQVEAPL DPRKELSRLI SECKYEEAFA
1101: IALQRSDVSI VSWLCTQVDL RAICYTVPLP LSQGVLLALL QQLACDIGTE ASRKVSWMTD VALVINPTDP MITSYIQPIL EQVYNILAHQ RSLPTTSASD
1201: VTNMRLVMHV INSVLMSCK
0101: NPGARLMALL NPPTSQFESA VSMPAPSTMP LELSPPANAV ALRSAPFTLA VVQPVPARLP SSKQPRGRLL GGGHTCAYDV DSRLLGESQP PQLEVTPITK
0201: YTSDPGLVLG RQIAVNRTYI CYGLKLGAIR VLNINTALRS LLKGHSQRVT DMTFFAEDVH LLASASIDGR VFVWKIDEVP DEENKPQITE KKIIAVQIVG
0301: NGESYHPRIC WHSHKQEFLF VGIGNRVLKI DLIRIGRGKE FSAEEPLKCP AEKLIDGIQL VGKHDGDVTD LSISQWMITR LVSASKDGTV KIWEDRKAVP
0401: LATLRPHDGE PVNSVAFMAS PHRPDHINLV TAGPLNREVK LWASTSEEGW LLPGDSESWQ CTQTLDLRSS LEPHLEDAFF NQIVVLPQAN LIVIANAKKN
0501: AIYAVHVDYG PCPASTHMDY IADFTVTMPI LSLTGTNDFL ADGEQVVQIY CVQTQAIQQY AMELNQCLPP PTANAQAFHG PPVMKVPELS TSKPEAKTDV
0601: PPLAEKDIDV QYVSSSVPVN LDLAGRLAGL SGPRKAEHGS PLVNNVVDHP KVQVLDTIIN NNIKSQEVEV KVAGKGRSGQ KEDFDTHKVP QSVTIEDKER
0701: PFQTLEATLG VDHESSMPPS TLKVDVEYKK RDMPEKESDV TAIPQSLSVA KGKKQKGKEH HMTDLSSPSL SPFDSNDSLN EPERSSVVPS TDAVIPQILA
0801: LQETLNQLMN MQKEMQKQMG VMLAAPIVNE GKRLETALGG CMEKAIKENA DVLWAHFQEE NWKHERVAKD QMQQLTNLIT NVMNRDLPVM LERTLKKEIS
0901: AVGPTVARAI TPVISSVITE LFQKGVGDKA VNQLEKSITA KLEATMSRQI QTQFQTSGKQ VLQDALRSCV ESSVVPAFEK SCKTMFEQVD SAFQKGMNEH
1001: TAAAQQQLEA AYTPLALTLR DAINSTSSIT QNLTTELIDG QRKLVALVAA GNTKAANPIS MQQTGAPMPG LPEMQVEAPL DPRKELSRLI SECKYEEAFA
1101: IALQRSDVSI VSWLCTQVDL RAICYTVPLP LSQGVLLALL QQLACDIGTE ASRKVSWMTD VALVINPTDP MITSYIQPIL EQVYNILAHQ RSLPTTSASD
1201: VTNMRLVMHV INSVLMSCK
0001: MASSPGNTNP HNTPPFDLGI LFKPSSNPYP PPAASYPPPT GPFLHNQYDQ QHYAPPGISA QPSPVTQQQQ DVSSSSAATN LHPQRTLSYP TPPLNLQSPR
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
Arabidopsis Description
VCSEnhancer of mRNA-decapping protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.