Factsheet for Zm00001d008821_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 4
extracellular 5
golgi 3
plasma membrane 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048003_P001	Maize	extracellular	84.51	70.59
VIT_00s2472g00010.t01	Wine grape	cytosol, peroxisome	58.45	54.25
Zm00001d002560_P001	Maize	mitochondrion	84.51	25.21
Solyc07g021140.1.1	Tomato	cytosol	9.86	10.69
EES05610	Sorghum	plastid	82.39	8.75
Zm00001d017883_P002	Maize	plastid	83.1	8.64
GSMUA_Achr3P10880_001	Banana	plastid	66.2	7.87
Os02t0722800-01	Rice	plasma membrane	71.13	7.54
Solyc03g071660.1.1	Tomato	cytosol	9.86	7.49
GSMUA_Achr5P04250_001	Banana	plastid	62.68	7.28
GSMUA_Achr3P04200_001	Banana	plastid	61.27	7.14
Bra034693.1-P	Field mustard	cytosol	57.04	7.03
KRG98417	Soybean	cytosol	54.23	6.9
GSMUA_Achr9P19760_001	Banana	plastid	63.38	6.77
CDY23580	Canola	plastid	57.04	6.7
CDY44010	Canola	plastid	57.75	6.62
VIT_00s0455g00020.t01	Wine grape	plastid	61.97	6.41
AT3G13300.1	Thale cress	cytosol	60.56	6.4
AT3G13290.1	Thale cress	cytosol	59.86	6.34
CDY44011	Canola	plastid	57.04	6.31
CDY23587	Canola	plastid	57.04	6.28
Zm00001d051678_P001	Maize	cytosol	61.27	6.27
Bra034692.1-P	Field mustard	cytosol, plastid	57.75	6.17
KRH11647	Soybean	endoplasmic reticulum	60.56	6.12
KRH36660	Soybean	endoplasmic reticulum	59.15	5.97
VIT_19s0015g01380.t01	Wine grape	plastid	58.45	5.92
KRH46493	Soybean	plastid	55.63	5.87
Solyc10g005920.2.1	Tomato	plastid	57.75	5.78
TraesCS6A01G286100.3	Wheat	golgi	50.7	5.68
TraesCS6D01G266500.2	Wheat	cytosol, plastid	50.7	5.45
TraesCS6B01G314800.3	Wheat	plastid	50.7	5.31
HORVU6Hr1G071910.3	Barley	cytosol, nucleus, plastid	50.7	5.19
Solyc07g065950.2.1	Tomato	plastid	50.0	5.05
Solyc11g032180.1.1	Tomato	cytosol	2.82	4.35
KRH46495	Soybean	cytosol	11.97	2.76
Solyc12g062490.1.1	Tomato	nucleus, plastid	1.41	1.64
KRH63269	Soybean	cytosol	1.41	1.25
Solyc09g055300.1.1	Tomato	cytosol	0.7	1.12
Solyc11g039850.1.1	Tomato	cytosol	0.7	0.96
VIT_03s0091g01220.t01	Wine grape	cytosol	2.11	0.92
Solyc02g005370.1.1	Tomato	cytosol	0.7	0.72
VIT_00s1618g00010.t01	Wine grape	cytosol	0.7	0.26
VIT_03s0091g01230.t01	Wine grape	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d008821_P001	EnsemblPlants:Zm00001d008821_T001	EnsemblPlantsGene:Zm00001d008821	Gene3D:1.10.220.100	PANTHER:PTHR15598	PANTHER:PTHR15598:SF6
ProteinID:AQK90760.1	SignalP:SignalP-noTM	UniParc:UPI000844840F	UniProt:A0A1D6FFR5	MapMan:35.1	:

Description

Enhancer of mRNA-decapping protein 4

Coordinates

chr8:-:21725645..21726186

Molecular Weight (calculated)

15897.7 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.609

Length

142 amino acids

Sequence
(BLAST)

001: MVFVFIKLLC TNILFNILYK FDEAFTMALQ RSDVSIVSWL CSQVDLRALC AMVPVPLNQG VFLALLQQLA IDIHNETSRK VQWMTDVAMA INPADQIIAV
101: HVPPIFEQVY SQLAHQRTLP TAASDGTSIR VIMHVINSVL LS

Best Arabidopsis Sequence Match ( AT3G13290.1 )
(BLAST)

0001: MASSPGNTNP HNPPPFDLGT IFKPSSNPYP PPTGPFLNNQ YNQQLYAPPG IAAQPSPVNQ TQQDVSSSSS ATNLQPQRTL SYPTPPLNPQ SPRVNHNPGT
0101: HILALLNNGG AVANQEPSHH NEIARAFPGG SGPIHVPSGK MPKGRRLVGE HAVYDVDVRL QGEIQPQLEV TPITKYGSDP QLVLGRQIAV NKVYICYGLK
0201: GGSIRVLNIN TALRSLFRGH SQRVTDMAFF AEDVHLLASV SLDGKVFVWK ISEGSEGDEQ SQITGKIVVA LQILGEEDTK HPRVCWHCHK QEILVVSIGK
0301: HVLRIDTTKV GRGEVFSAEA PLQCHLDKLI DGVQIVGKHD GEVTDLSMCQ WMTTRLVSSS VDGTVKIWQD RKTQPLVVLR PHDGLPVNSA IFVTSPERPD
0401: HIILITGGPL NREIKIWVSA GEEGWLLPAD TESWRCTQTL DLKSSTEPQA EKAFFNQVIA LSEAGLLLLA NARRNAIYSV HLDYGSSPVE TLMDYLSEFT
0501: VTMPILSFIG TNDHPEEPFV KVYCVQTLAI QQYTLDLFLC MPPPRENVGF EKSDSTVSRE ANLVESTLET SGMKPTELPS VGSVPKPSIL VNRSENANML
0601: SFPAGPASAG ITPPAIVPPN GEPKTSGMPS ETSDVDSAYA PSPQLPLSPR LSSKLSGYHT PVEAFEQVLP HHKLGGKTSS ADYFYVRQTD DVGGRNLDVS
0701: SVEENCRSKD TNVTPDDDVS GIRSPSAFFK QPTHLVTPSE ILMGVSSTEA SITTEDKRDR DANIEEVNND ARGLEVELKE VGEAQTSQNG EINYHETTEN
0801: HTSESRENIF CSQASNLSTE MARDRHPITE GSAIPGDSMA YGQPLQAGDE RGLDSRDVSA KLPESGSSSG LVATNSKGKK QKAKNSQGPG LSSTSSNVAN
0901: LADSFNEQSQ SLNHPMADLL PQLLALQETM TQVMASQKEM QRQLSNAVTG PIVKEGKKLE VALGRMIEKS SKSNADALWA HFQEEAVKNE KALRDHGQQI
1001: MNETTNFTSK ELNAMFEKTM KKEFASVGPT LARVVTPVIE KTVSSAITES FQRGIGDKAV NQLEKSVNSK LETTVARQIQ AQFQTSGRQV LQEGLRSSME
1101: SSVIPSFERS CKTMFEQVDS TLQKGIGKHT SATQQRIDSG QSQLAHTLRE TISSASSVTQ ALNRELAESQ RNRLALTAAG SNPLVTQLSN GPLGALLEKV
1201: EAPMDPTTEL SRLISERKYE ESFTSALQRS DVSIVSWLCS QVDLRGLLAM NPLPLSQGVL LSLLQQLACD ISTDTSRKLG WMTDVVTAIN PSDQMIAVHA
1301: RPIFEQVYQI LHHHRNAPGS DVSAVRLIMH VINSLLMSCK

Arabidopsis Description

VCRVaricose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.