CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1618g00010.t01	Wine grape	cytosol	29.38	46.65
KRG98417	Soybean	cytosol	65.1	35.93
KRH46493	Soybean	plastid	65.91	30.16
HORVU7Hr1G045240.3	Barley	plastid	33.77	25.94
GSMUA_Achr3P10880_001	Banana	plastid	42.69	22.03
VIT_00s0455g00020.t01	Wine grape	plastid	46.92	21.05
GSMUA_Achr5P04250_001	Banana	plastid	41.72	21.01
GSMUA_Achr3P04200_001	Banana	plastid	40.26	20.34
TraesCS6A01G286100.3	Wheat	golgi	40.75	19.81
TraesCS7D01G221700.1	Wheat	plastid	40.75	19.58
EES05610	Sorghum	plastid	42.37	19.52
TraesCS7A01G220400.4	Wheat	plastid	41.23	19.43
TraesCS7B01G127000.4	Wheat	plastid	41.07	19.34
Zm00001d017883_P002	Maize	plastid	42.53	19.18
GSMUA_Achr9P19760_001	Banana	plastid	41.07	19.04
KRH11647	Soybean	endoplasmic reticulum	43.34	19.0
Os02t0722800-01	Rice	plasma membrane	41.23	18.97
KRH36660	Soybean	endoplasmic reticulum	43.02	18.83
TraesCS6D01G266500.2	Wheat	cytosol, plastid	40.26	18.77
Os06t0300800-01	Rice	plasma membrane	40.58	18.74
TraesCS6B01G314800.3	Wheat	plastid	40.91	18.58
Zm00001d051678_P001	Maize	cytosol	41.4	18.39
HORVU6Hr1G071910.3	Barley	cytosol, nucleus, plastid	41.07	18.23
Zm00001d048003_P001	Maize	extracellular	3.73	13.53
VIT_00s2472g00010.t01	Wine grape	cytosol, peroxisome	3.25	13.07
Zm00001d008821_P001	Maize	extracellular	2.76	11.97
Solyc11g032180.1.1	Tomato	cytosol	1.62	10.87
Zm00001d002560_P001	Maize	mitochondrion	7.79	10.08
KRH63269	Soybean	cytosol	2.27	8.75

Protein Annotations

MapMan:16.8.2.2.4	Gene3D:2.130.10.10	UniProt:A0A0R0J6N9	EMBL:ACUP02005347	InterPro:CK2S	InterPro:EDC4_WD40
EnsemblPlantsGene:GLYMA_08G337400	GO:GO:0000932	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0031087	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
EnsemblPlants:KRH46495	ProteinID:KRH46495	ProteinID:KRH46495.1	PFAM:PF15011	PFAM:PF16529	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR15598	PANTHER:PTHR15598:SF7	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0006EE09A1
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:45423081..45432788

Molecular Weight (calculated)

68174.7 Da

IEP (calculated)

5.789

GRAVY (calculated)

-0.097

Length

616 amino acids

Sequence
(BLAST)

001: MFISWLDGRV YVWKITEGPD DEDKPQITSN IVIALQIVGE EKVEHPQICW HCHKQEILIV GMGKHVLRID TTKVGNGEAF VVDDPLRCPV DKLIDGVQLV
101: GTHDGEVTDL SMCQWMTNQL VSASQDGTIK IWEDRKTQPL AILRPHDGNP VFSATFFTAP HQPDHIVLIT AGPQNREVKL WVSASDKGWV LPSDTESWKC
201: TQTLELKSSA QPSMDAFFNQ VAALSHAAGL LLLANAQRNA IYAVHLEYGS NPESTRMDYI AEFTVTMPIL SFTGTSDILP HGEHIVQVYC VQTQAIQQYA
301: LDLAQCLPPP YENVGLENSD SSVSRDPITV EGFHSLDSSA GRTTEMSLAS SAPKTMLQTS SNEGGLVARY PLSSGHVEAP ISRGISSSNT EAKPATLRSV
401: SLSPRLIAGS SLVSSGLTME AIVKKFQSKF RKVREAMSRW DKLQSCLISQ FRNAFHIVDR LQVLQNSNNY GVLNCASGMK DALLVKQIES LRNILVSMRK
501: TLEEFHCIVL SLDKIHHDSR QQVKGGSCIL NMKQLQQQIG IKPSLIYCLD SLMFIHEIYN SEYLLKSSVI SALSEIALKP SDSDLGALQQ LLVDQPNLQT
601: VEVQFVFDVI FAEELS

Best Arabidopsis Sequence Match ( AT5G43822.1 )
(BLAST)

001: MEAVIRKWQQ KFRKGKEEME KWEALQVRWV SLFRNASSII QRLQEMQNHG SYGALRCLKG IEDAVVQQQM GQLESLLRSM KNVMEEFWGC VLTFEKLHRD
101: GLQLREIESS KRRVEERIGV KPCITDCLEG LSILYDMHQS EYHLKSSILS VLSCLILKPS PGDLNALQYL VVDQPNIPKD EVQHIFDVIF AEEIK

Arabidopsis Description

Uncharacterized protein At5g43822 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPG7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.