Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44010 | Canola | plastid | 91.47 | 95.24 |
| CDY23580 | Canola | plastid | 71.55 | 76.34 |
| CDY44011 | Canola | plastid | 74.96 | 75.31 |
| AT3G13300.1 | Thale cress | cytosol | 76.51 | 73.44 |
| AT3G13290.1 | Thale cress | cytosol | 73.8 | 71.04 |
| Zm00001d008821_P001 | Maize | extracellular | 6.28 | 57.04 |
| Solyc03g071660.1.1 | Tomato | cytosol | 7.98 | 55.08 |
| Solyc09g055300.1.1 | Tomato | cytosol | 3.8 | 55.06 |
| KRG98417 | Soybean | cytosol | 44.5 | 51.43 |
| KRH46493 | Soybean | plastid | 53.57 | 51.34 |
| VIT_19s0015g01380.t01 | Wine grape | plastid | 55.66 | 51.25 |
| Zm00001d048003_P001 | Maize | extracellular | 6.74 | 51.18 |
| Solyc07g021140.1.1 | Tomato | cytosol | 5.19 | 51.15 |
| Solyc07g065950.2.1 | Tomato | plastid | 53.8 | 49.32 |
| Solyc10g005920.2.1 | Tomato | plastid | 53.41 | 48.59 |
| GSMUA_Achr5P04250_001 | Banana | plastid | 46.05 | 48.57 |
| GSMUA_Achr3P10880_001 | Banana | plastid | 44.34 | 47.91 |
| GSMUA_Achr3P04200_001 | Banana | plastid | 44.96 | 47.58 |
| EES05610 | Sorghum | plastid | 47.29 | 45.62 |
| Os02t0722800-01 | Rice | plasma membrane | 46.9 | 45.18 |
| GSMUA_Achr9P19760_001 | Banana | plastid | 46.51 | 45.15 |
| Zm00001d017883_P002 | Maize | plastid | 47.75 | 45.1 |
| Solyc12g062490.1.1 | Tomato | nucleus, plastid | 4.26 | 45.08 |
| Solyc02g005370.1.1 | Tomato | cytosol | 4.81 | 44.93 |
| TraesCS7A01G220400.4 | Wheat | plastid | 45.27 | 44.68 |
| TraesCS7B01G127000.4 | Wheat | plastid | 45.27 | 44.65 |
| TraesCS7D01G221700.1 | Wheat | plastid | 44.34 | 44.62 |
| Os06t0300800-01 | Rice | plasma membrane | 46.12 | 44.6 |
| Solyc11g039850.1.1 | Tomato | cytosol | 3.57 | 44.23 |
| TraesCS6A01G286100.3 | Wheat | golgi | 42.71 | 43.49 |
| TraesCS6D01G266500.2 | Wheat | cytosol, plastid | 43.72 | 42.69 |
| Zm00001d051678_P001 | Maize | cytosol | 45.19 | 42.03 |
| TraesCS6B01G314800.3 | Wheat | plastid | 44.11 | 41.96 |
| HORVU6Hr1G071910.3 | Barley | cytosol, nucleus, plastid | 44.65 | 41.5 |
| HORVU7Hr1G045240.3 | Barley | plastid | 25.43 | 40.9 |
| VIT_03s0091g01220.t01 | Wine grape | cytosol | 10.08 | 39.76 |
| Zm00001d002560_P001 | Maize | mitochondrion | 14.65 | 39.71 |
| VIT_03s0091g01230.t01 | Wine grape | nucleus | 6.36 | 31.42 |
Protein Annotations
| Gene3D:1.10.220.100 | MapMan:16.8.2.2.4 | Gene3D:2.130.10.10 | UniProt:A0A078GES1 | EnsemblPlants:CDY23587 | ProteinID:CDY23587 |
| ProteinID:CDY23587.1 | InterPro:EDC4_WD40 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00023789001 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF16529 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR15598 | PANTHER:PTHR15598:SF7 | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF81995 | UniParc:UPI0004EEF217 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
BnaC05g40070DBnaC05g40070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GES1]
Coordinates
chrLK032145:+:211770..218003
Molecular Weight (calculated)
140286.0 Da
IEP (calculated)
6.045
GRAVY (calculated)
-0.368
Length
1290 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASSPGNPNP NNPPPFDLGT LFKPSSSPFP TPPASYPPPA GPFLQQPYPP PPQQQEAAPS SSSSLLQQQR SLPFPSPPLN LPQSPSPRAS ANHNPGTHIL
0101: ALLNNNNNNG ATNQDPPPQH QAPVASPHEI RSFPSSPVRV PSCKLPRGRR LSGEHAVYDV DVRLHGEIQP QLEVTPITKY GSDPQLVVGR QIAVNKIYIC
0201: YGLKGGNIRV LNINTALRAL FRGHSQRVTD MAFFAHDVHL LASVSLDGKV FVWKISEGSE GDDDPQITGK IVLALQILGE EDTKHPRVCW HSHKQEILVV
0301: SIGKHVLLID TTKVGRGEVF SSESPIQCHL DKLVDGVKIV GKHDGEVTDL SMCQWMITRL VSSSVDGTVK IWQDFKAQPV AVLRPHDGHP VNSATFVTSP
0401: ERSDHVILIT GGPLNREMKI WVPTGEEGWL LPAESESWNC TQKLDLKSST EPRAEMAFFN QVIALSEAGL LLLANAKRNA IYAVHLDYGS SPADTRMDYL
0501: SEFTVTMPIL SFIGTNDPPE EAVVKVYCVQ TQAIQQYTLD LCLCLPPPIE ESVGLEKSDS SVSREANLVE GISKPSGMKL TDLPSADSVP KPSILVNRSK
0601: GANTSTYLAG SASVETTAPV LVSSNGEPKA SGLLSETSAA GSAYATSPQL PLSPRLSSTL CGHQTPVDES SRSKDKDVTP ADDVSGMRTP QAFFKHPTHL
0701: VTPSEFLMRV SSAEASITTE DKRDRDANIQ DVNIDSRDTE VEVKEVGESS STQNGEINYS DETEHRTSVN TEKIFYSQTT NLSTEMARDC YPGTELEESK
0801: AYEQSVQAGD NLESRDVSGK LPESVSSIGL PHSQGPGLSS TSSNVANLAD TYNEQTQSSS QPILALQETM NQMMVSQKEM MVSQKEMQRQ LSNAVNGPVT
0901: KEGKRLEVAI GRMIERSSKS NADALWARLQ EEIVKNEKAM RDNSQQIVNA VTNFMSKELN ALFEKTIKKE IATNIPAIAR ALSPAIEKTV SSSVTESFQR
1001: GLGDKSVNQL DKSVNSKLEA TITKQIQTQF QTSGRQALQE ALRSGLEASL IPSFERSCKT MFEQVDAAFQ KGMAEHTNAA QQRFDAGHSQ LAHTLKETIT
1101: SASSVAQALS RELAESQRNR LALAAAGANS SGSNTLVSQR SSGPLGALLE KVEADPITEL SRLILERKYE ESFTSALYRS DVSIVSWLCS QVDLRGLLAM
1201: NPLPLSQGVL LSLLQQLAFD ISKDSSRKLA WMTDVVAAIN PSDPMVAVHG RPIFEQVYQI LHHHRNTPGS DVSATRLIMH VINSMLMACK
0101: ALLNNNNNNG ATNQDPPPQH QAPVASPHEI RSFPSSPVRV PSCKLPRGRR LSGEHAVYDV DVRLHGEIQP QLEVTPITKY GSDPQLVVGR QIAVNKIYIC
0201: YGLKGGNIRV LNINTALRAL FRGHSQRVTD MAFFAHDVHL LASVSLDGKV FVWKISEGSE GDDDPQITGK IVLALQILGE EDTKHPRVCW HSHKQEILVV
0301: SIGKHVLLID TTKVGRGEVF SSESPIQCHL DKLVDGVKIV GKHDGEVTDL SMCQWMITRL VSSSVDGTVK IWQDFKAQPV AVLRPHDGHP VNSATFVTSP
0401: ERSDHVILIT GGPLNREMKI WVPTGEEGWL LPAESESWNC TQKLDLKSST EPRAEMAFFN QVIALSEAGL LLLANAKRNA IYAVHLDYGS SPADTRMDYL
0501: SEFTVTMPIL SFIGTNDPPE EAVVKVYCVQ TQAIQQYTLD LCLCLPPPIE ESVGLEKSDS SVSREANLVE GISKPSGMKL TDLPSADSVP KPSILVNRSK
0601: GANTSTYLAG SASVETTAPV LVSSNGEPKA SGLLSETSAA GSAYATSPQL PLSPRLSSTL CGHQTPVDES SRSKDKDVTP ADDVSGMRTP QAFFKHPTHL
0701: VTPSEFLMRV SSAEASITTE DKRDRDANIQ DVNIDSRDTE VEVKEVGESS STQNGEINYS DETEHRTSVN TEKIFYSQTT NLSTEMARDC YPGTELEESK
0801: AYEQSVQAGD NLESRDVSGK LPESVSSIGL PHSQGPGLSS TSSNVANLAD TYNEQTQSSS QPILALQETM NQMMVSQKEM MVSQKEMQRQ LSNAVNGPVT
0901: KEGKRLEVAI GRMIERSSKS NADALWARLQ EEIVKNEKAM RDNSQQIVNA VTNFMSKELN ALFEKTIKKE IATNIPAIAR ALSPAIEKTV SSSVTESFQR
1001: GLGDKSVNQL DKSVNSKLEA TITKQIQTQF QTSGRQALQE ALRSGLEASL IPSFERSCKT MFEQVDAAFQ KGMAEHTNAA QQRFDAGHSQ LAHTLKETIT
1101: SASSVAQALS RELAESQRNR LALAAAGANS SGSNTLVSQR SSGPLGALLE KVEADPITEL SRLILERKYE ESFTSALYRS DVSIVSWLCS QVDLRGLLAM
1201: NPLPLSQGVL LSLLQQLAFD ISKDSSRKLA WMTDVVAAIN PSDPMVAVHG RPIFEQVYQI LHHHRNTPGS DVSATRLIMH VINSMLMACK
0001: MASSPGNTNP HNTPPFDLGI LFKPSSNPYP PPAASYPPPT GPFLHNQYDQ QHYAPPGISA QPSPVTQQQQ DVSSSSAATN LHPQRTLSYP TPPLNLQSPR
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
0101: SNHNPGTHIL ALLNNTNNGA PVANQEPSHQ LPVVNHNEIA RSFPGGSGPI RVPSCKLPKG RRLIGEHAVY DVDVRLQGEI QPQLEVTPIT KYGSDPQLVV
0201: GRQIAVNKVY ICYGLKGGNI RVLNINTALR SLFRGHSQRV TDMAFFAEDV DMLASVSLDG KVFVWKISEG SEGEDQPQIT GKIVLALQIL GEEDTKHPRV
0301: CWHCHKQEIL VVSIGKHVLR IDTTKVGRGE VFSAEAPLQC PLDKLIDGVQ IVGKHDGEVT DLSMCQWMTT RLVSSSVDGT IKIWQDRKAQ PLVVLRPHDG
0401: HPVSSATFVT SPERPDHIIL ITGGPLNREM KIWVSAGEEG WLLPADAESW RCTQTLDLKS STEPRAEEAF FNQVIALSEA GLLLLANAKR NALYAVHLDY
0501: GSSPVGTRMD YLSEFTVTMP ILSFIGTNDP PEEPIVKVYC VQTLAIQQYT LDLCLCLPPP IENMGLEKSD SSVSREANLV EGMSEPSGLK PTDLPSVDSV
0601: PKPSIIVNRS ESANKLSFPS AEATSQAIVP PNGEPKTSGL PSQTSGAGSA YATLPQLPLS PRLSSKLSGY HTPVEAIEPV IPHHELGGKT PSADYSVDRQ
0701: MDAVGERNLD VSSVEEISRS KDSNVTPDDD VSGMRSPSAF FKHPTHLVTP SEILMGVSSA EASITTEDRR DRDANIQDVN NDPRDTEVEV KEISEARSTQ
0801: NGEINDHDET ENCTSENREK VFCSQVSNLS TEMARDCYPS TEGTFIPGES KAYGQPIKAG DESGVDSRGG PAKLLKGKKQ KAKNSQGPGL SSTSSNVANL
0901: ADSFNEQSQS LSHPMTDLLP QLLAMQETMN QVMASQKEMQ RQLSNAATGP IGKESKRLEV ALGRMIEKSS KSNADALWAR IQEETVKNEK ALRDHAQQIV
1001: NATTNFMSKE LNAMFEKTIK KELAAIGPAL ARSVVPVIEK TVSSAITESF QRGIGDKAVN QLDKSVNIKL EATVARQIQA QFQTSGKQAL QEGLRSSVES
1101: SVIPSFEKAC KAMFDQIDSA FQKGIAEHTN AAQQRFDSGH SQLAHTLKES ITSASSVAQA LSRELAETQR NLLALAAAGA NSGGSNSLVT QLSGGPLGAL
1201: LEKVEAPMDP TTELSRLISE RKYEESFTSA LQRSDVSIVS WLCSQVDLRG LLAMNPLPLS QGVLLSLLQQ LACDISKDTS RKLAWMTDVV AAINPSDQMI
1301: AVHARPIFEQ VYQILHHHRN APGSDVSAIR LIMHVINSML MGCK
Arabidopsis Description
VCSEnhancer of mRNA-decapping protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.