Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030733.1-P | Field mustard | cytosol | 97.37 | 97.37 |
| CDX97497 | Canola | cytosol | 94.74 | 95.05 |
| CDX95050 | Canola | cytosol | 89.47 | 88.6 |
| CDX93553 | Canola | cytosol | 89.14 | 88.27 |
| AT1G08560.1 | Thale cress | cytosol | 83.22 | 81.61 |
| VIT_04s0008g02770.t01 | Wine grape | cytosol | 74.01 | 72.35 |
| PGSC0003DMT400041982 | Potato | cytosol | 71.38 | 69.77 |
| Solyc06g053760.2.1 | Tomato | cytosol | 70.39 | 68.81 |
| GSMUA_Achr1P25170_001 | Banana | cytosol | 54.61 | 67.76 |
| KRH08461 | Soybean | cytosol | 69.08 | 65.22 |
| KRH70119 | Soybean | cytosol | 66.12 | 63.21 |
| TraesCS4B01G067100.1 | Wheat | cytosol | 31.91 | 59.51 |
| KXG37622 | Sorghum | cytosol | 60.2 | 58.65 |
| Zm00001d013323_P001 | Maize | cytosol | 59.87 | 57.96 |
| Os03t0736500-01 | Rice | cytosol, plasma membrane | 58.88 | 57.56 |
| Zm00001d033919_P001 | Maize | plasma membrane | 59.21 | 57.51 |
| TraesCS4D01G066100.1 | Wheat | cytosol | 56.58 | 54.43 |
| TraesCS4B01G067200.1 | Wheat | cytosol | 55.59 | 53.82 |
| TraesCS4A01G247700.1 | Wheat | cytosol | 55.59 | 53.48 |
| HORVU4Hr1G011180.2 | Barley | cytosol | 56.58 | 47.38 |
| CDY34843 | Canola | cytosol | 43.42 | 44.3 |
| CDY34656 | Canola | cytosol | 43.09 | 43.96 |
| CDY20986 | Canola | cytosol | 42.76 | 43.62 |
| CDY19350 | Canola | cytosol | 42.76 | 43.62 |
| CDX97943 | Canola | cytosol | 42.76 | 43.62 |
| CDY70107 | Canola | cytosol | 42.43 | 43.29 |
| CDY48554 | Canola | cytosol | 43.09 | 42.95 |
| CDY21958 | Canola | cytosol | 42.76 | 42.62 |
| CDY50666 | Canola | cytosol | 18.75 | 42.22 |
| CDY21160 | Canola | cytosol | 18.42 | 42.11 |
| CDY51747 | Canola | cytosol | 18.42 | 41.48 |
| CDY46302 | Canola | cytosol | 37.17 | 39.24 |
| CDY70958 | Canola | cytosol | 42.76 | 39.04 |
| CDY20921 | Canola | cytosol | 36.51 | 38.81 |
| CDY01061 | Canola | cytosol, plastid | 42.76 | 38.81 |
| CDX73851 | Canola | cytosol | 42.43 | 38.62 |
| CDY08492 | Canola | cytosol | 42.76 | 38.35 |
| CDY29223 | Canola | cytosol | 36.18 | 38.33 |
| CDY25157 | Canola | cytosol | 25.0 | 37.62 |
| CDY23212 | Canola | cytosol | 40.79 | 36.15 |
| CDY29963 | Canola | cytosol | 36.18 | 35.48 |
| CDY29079 | Canola | cytosol, golgi, nucleus | 39.14 | 35.42 |
| CDX90604 | Canola | cytosol, golgi, nucleus | 38.49 | 35.03 |
| CDY21161 | Canola | cytosol | 18.42 | 31.28 |
| CDY51748 | Canola | cytosol | 17.76 | 30.51 |
| CDY50665 | Canola | cytosol | 16.78 | 29.31 |
| CDX95336 | Canola | cytosol | 9.87 | 28.57 |
| TraesCS6B01G175300.1 | Wheat | cytosol | 26.97 | 26.8 |
| OQU78880 | Sorghum | cytosol | 26.64 | 26.3 |
| Zm00001d035331_P001 | Maize | cytosol | 25.66 | 26.17 |
| HORVU6Hr1G028850.1 | Barley | cytosol | 26.32 | 26.14 |
| TraesCS6A01G147100.1 | Wheat | cytosol | 26.32 | 26.14 |
| TraesCS6D01G136400.1 | Wheat | cytosol | 26.32 | 26.14 |
| Os12t0192300-00 | Rice | plasma membrane | 26.97 | 23.56 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:13.4.2.3.1 | MapMan:22.7.1.1 | GO:A0A078H0Y4 | UniProt:A0A078H0Y4 |
| EnsemblPlants:CDY31137 | ProteinID:CDY31137 | ProteinID:CDY31137.1 | ncoils:Coil | InterPro:DZF_dom | GO:GO:0003674 |
| GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0061025 | EnsemblPlantsGene:GSBRNA2T00047225001 | InterPro:IPR000727 | PFAM:PF00804 |
| PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PFscan:PS51703 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF91 |
| SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N |
| TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0004EE64B5 | SEG:seg | : | : |
Description
BnaA08g26870DBnaA08g26870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0Y4]
Coordinates
chrLK032267:+:391879..392793
Molecular Weight (calculated)
34748.9 Da
IEP (calculated)
6.650
GRAVY (calculated)
-0.490
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLMTKSFT SYVDLKKAAM KDLESGLDDL EMTNKTDENL SSFLEEAEKV KSEMSLIEAA LSRISRYNDE SKSAHRSESV KSLRNKISNE IVSGLRKAKS
101: IKSNLEEMDR ANREIKRLSG TTPVYRSRVT VTNGLRKKLK EVMMEFQGLR QRMMSEYKET VERRYFTVTG ERPDEEMIEK IVTDGGEEFL TRAIQEHGRG
201: KVLETVVEIQ DRYDAAKEIE KSLLELHQVF LDMAVMVEAQ GEQMDEIEHH VMSAGHYVKD GAKELKTAKN HQRSSRKWMC VGVIVLLLIV LVVVIPIVTS
301: FTSS
101: IKSNLEEMDR ANREIKRLSG TTPVYRSRVT VTNGLRKKLK EVMMEFQGLR QRMMSEYKET VERRYFTVTG ERPDEEMIEK IVTDGGEEFL TRAIQEHGRG
201: KVLETVVEIQ DRYDAAKEIE KSLLELHQVF LDMAVMVEAQ GEQMDEIEHH VMSAGHYVKD GAKELKTAKN HQRSSRKWMC VGVIVLLLIV LVVVIPIVTS
301: FTSS
001: MNDLMTKSFM SYVDLKKAAM KDMEAGPDFD LEMASTKADK MDENLSSFLE EAEYVKAEMG LISETLARIE QYHEESKGVH KAESVKSLRN KISNEIVSGL
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
Arabidopsis Description
KNSYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.