Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77611 | Canola | cytosol | 100.0 | 100.0 |
| CDY60533 | Canola | cytosol | 100.0 | 100.0 |
| CDY23103 | Canola | cytosol | 100.0 | 100.0 |
| CDX78887 | Canola | cytosol | 99.42 | 99.42 |
| CDY62552 | Canola | cytosol | 99.42 | 99.42 |
| CDY39447 | Canola | cytosol | 99.42 | 99.42 |
| AT2G42740.1 | Thale cress | cytosol | 99.42 | 93.96 |
| CDY64920 | Canola | cytosol | 99.42 | 93.44 |
| AT3G58700.1 | Thale cress | cytosol | 98.84 | 93.41 |
| CDX99436 | Canola | cytosol, extracellular | 99.42 | 92.93 |
| KRH62765 | Soybean | cytosol | 55.23 | 92.23 |
| TraesCS1B01G144300.1 | Wheat | cytosol | 88.95 | 91.07 |
| CDX98322 | Canola | cytosol | 76.16 | 90.34 |
| KRH56423 | Soybean | cytosol | 94.77 | 90.06 |
| KRH55704 | Soybean | cytosol | 94.77 | 90.06 |
| KRH62493 | Soybean | endoplasmic reticulum, nucleus | 94.77 | 90.06 |
| KRH25821 | Soybean | cytosol | 94.77 | 90.06 |
| KRH13277 | Soybean | cytosol | 94.77 | 90.06 |
| Os02t0235600-01 | Rice | cytosol, golgi, nucleus, plasma membrane | 94.77 | 89.56 |
| Solyc12g010930.1.1 | Tomato | extracellular | 94.19 | 89.5 |
| Solyc10g007980.2.1 | Tomato | cytosol | 94.19 | 89.5 |
| Solyc07g055230.2.1 | Tomato | cytosol | 94.19 | 89.5 |
| Solyc02g086240.2.1 | Tomato | cytosol | 94.19 | 89.5 |
| PGSC0003DMT400067873 | Potato | cytosol | 94.19 | 89.5 |
| PGSC0003DMT400052643 | Potato | cytosol | 94.19 | 89.5 |
| PGSC0003DMT400027379 | Potato | cytosol | 94.19 | 89.5 |
| PGSC0003DMT400020315 | Potato | cytosol | 94.19 | 89.5 |
| KRH55687 | Soybean | nucleus | 94.19 | 89.5 |
| KRH25819 | Soybean | nucleus | 94.19 | 89.5 |
| KXG29884 | Sorghum | cytosol | 94.19 | 89.01 |
| EES04818 | Sorghum | cytosol | 94.19 | 89.01 |
| EES04817 | Sorghum | cytosol | 94.19 | 89.01 |
| Os05t0207300-01 | Rice | plasma membrane | 93.6 | 88.46 |
| Os01t0205500-01 | Rice | nucleus | 93.6 | 88.46 |
| EES17871 | Sorghum | cytosol | 40.12 | 88.46 |
| KXG31594 | Sorghum | cytosol | 93.02 | 87.91 |
| VIT_10s0003g01520.t01 | Wine grape | cytosol | 94.77 | 87.63 |
| HORVU3Hr1G026060.1 | Barley | cytosol, plasma membrane | 91.28 | 87.22 |
| TraesCS3A01G136800.1 | Wheat | cytosol | 91.28 | 87.22 |
| TraesCS3B01G154600.1 | Wheat | cytosol | 91.28 | 87.22 |
| TraesCS3D01G137600.1 | Wheat | cytosol, extracellular, golgi | 91.28 | 87.22 |
| TraesCS1A01G125100.1 | Wheat | nucleus | 90.12 | 86.11 |
| TraesCS1D01G128800.1 | Wheat | cytosol, golgi, unclear | 90.12 | 86.11 |
| HORVU0Hr1G003140.1 | Barley | mitochondrion | 35.47 | 83.56 |
| HORVU1Hr1G032650.1 | Barley | mitochondrion | 43.02 | 81.32 |
| Os06t0550000-00 | Rice | plastid | 93.6 | 80.9 |
| GSMUA_Achr9P28800_001 | Banana | cytosol | 14.53 | 80.65 |
| CDX88999 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 100.0 | 79.26 |
| HORVU7Hr1G044560.1 | Barley | mitochondrion | 43.6 | 78.95 |
| KXG20149 | Sorghum | cytosol | 87.79 | 78.65 |
| KRH16362 | Soybean | mitochondrion | 40.12 | 77.53 |
| KRH56320 | Soybean | cytosol, nucleus | 88.95 | 76.88 |
| CDY26360 | Canola | plastid | 100.0 | 75.77 |
| HORVU1Hr1G028820.1 | Barley | mitochondrion | 90.12 | 75.24 |
| CDX87764 | Canola | mitochondrion | 99.42 | 75.0 |
| EES00248 | Sorghum | cytosol, plastid, vacuole | 20.93 | 73.47 |
| Solyc04g080150.1.1 | Tomato | unclear | 40.12 | 70.41 |
| CDX71934 | Canola | cytosol | 100.0 | 67.45 |
| CDY49245 | Canola | cytosol | 100.0 | 66.41 |
| HORVU7Hr1G062960.1 | Barley | cytosol, mitochondrion, plastid | 34.3 | 61.46 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 9.3 | 10.67 |
| Zm00001d000159_P001 | Maize | cytosol | 2.33 | 8.33 |
Protein Annotations
| MapMan:17.1.2.1.11 | Gene3D:3.30.1440.10 | GO:A0A078EHJ4 | UniProt:A0A078EHJ4 | EnsemblPlants:CDY00582 | ProteinID:CDY00582 |
| ProteinID:CDY00582.1 | ProteinID:CDY23103.1 | ProteinID:CDY60533.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| EnsemblPlantsGene:GSBRNA2T00110344001 | InterPro:IPR022803 | PFAM:PF00281 | PFAM:PF00673 | PIRSF:PIRSF002161 | ScanProsite:PS00358 |
| PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 | InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_C | InterPro:Ribosomal_L5_CS | InterPro:Ribosomal_L5_N |
| InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 | UniParc:UPI0004EEC2A8 | SEG:seg | : | : |
Description
BnaC04g23430DBnaAnng16950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EHJ4]
Coordinates
chrLK031920:+:456148..457171
Molecular Weight (calculated)
19732.0 Da
IEP (calculated)
10.453
GRAVY (calculated)
-0.426
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGDKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGIQE
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.