Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17871 | Sorghum | cytosol | 75.51 | 47.44 |
| HORVU1Hr1G032650.1 | Barley | mitochondrion | 67.35 | 36.26 |
| KRH16362 | Soybean | mitochondrion | 65.31 | 35.96 |
| HORVU7Hr1G044560.1 | Barley | mitochondrion | 69.39 | 35.79 |
| KRH62765 | Soybean | cytosol | 73.47 | 34.95 |
| HORVU0Hr1G003140.1 | Barley | mitochondrion | 42.86 | 28.77 |
| CDX98322 | Canola | cytosol | 71.43 | 24.14 |
| CDY62552 | Canola | cytosol | 73.47 | 20.93 |
| CDY60533 | Canola | cytosol | 73.47 | 20.93 |
| CDY39447 | Canola | cytosol | 73.47 | 20.93 |
| CDY23103 | Canola | cytosol | 73.47 | 20.93 |
| CDY00582 | Canola | cytosol | 73.47 | 20.93 |
| CDX77611 | Canola | cytosol | 73.47 | 20.93 |
| CDX78887 | Canola | cytosol | 73.47 | 20.93 |
| VIT_12s0028g01800.t01 | Wine grape | cytosol | 73.47 | 20.81 |
| PGSC0003DMT400020315 | Potato | cytosol | 75.51 | 20.44 |
| PGSC0003DMT400027379 | Potato | cytosol | 75.51 | 20.44 |
| PGSC0003DMT400052643 | Potato | cytosol | 75.51 | 20.44 |
| PGSC0003DMT400067873 | Potato | cytosol | 75.51 | 20.44 |
| Solyc02g086240.2.1 | Tomato | cytosol | 75.51 | 20.44 |
| Solyc07g055230.2.1 | Tomato | cytosol | 75.51 | 20.44 |
| Solyc10g007980.2.1 | Tomato | cytosol | 75.51 | 20.44 |
| Solyc12g010930.1.1 | Tomato | extracellular | 75.51 | 20.44 |
| KXG31594 | Sorghum | cytosol | 75.51 | 20.33 |
| KRH13277 | Soybean | cytosol | 73.47 | 19.89 |
| KRH25819 | Soybean | nucleus | 73.47 | 19.89 |
| KRH25821 | Soybean | cytosol | 73.47 | 19.89 |
| KRH55687 | Soybean | nucleus | 73.47 | 19.89 |
| KRH55704 | Soybean | cytosol | 73.47 | 19.89 |
| KRH56423 | Soybean | cytosol | 73.47 | 19.89 |
| KRH62493 | Soybean | endoplasmic reticulum, nucleus | 73.47 | 19.89 |
| KXG29884 | Sorghum | cytosol | 73.47 | 19.78 |
| AT3G58700.1 | Thale cress | cytosol | 73.47 | 19.78 |
| AT2G42740.1 | Thale cress | cytosol | 73.47 | 19.78 |
| Bra012580.1-P | Field mustard | cytosol | 73.47 | 19.78 |
| AT5G45775.2 | Thale cress | cytosol | 73.47 | 19.78 |
| Bra013342.1-P | Field mustard | cytosol | 73.47 | 19.78 |
| Bra021990.1-P | Field mustard | cytosol | 73.47 | 19.78 |
| Bra025058.1-P | Field mustard | cytosol | 73.47 | 19.78 |
| AT4G18730.1 | Thale cress | cytosol | 73.47 | 19.78 |
| EES04817 | Sorghum | cytosol | 73.47 | 19.78 |
| EES04818 | Sorghum | cytosol | 73.47 | 19.78 |
| CDY64920 | Canola | cytosol | 73.47 | 19.67 |
| CDX99436 | Canola | cytosol, extracellular | 73.47 | 19.57 |
| VIT_10s0003g01520.t01 | Wine grape | cytosol | 73.47 | 19.35 |
| KXG20149 | Sorghum | cytosol | 75.51 | 19.27 |
| KRH56320 | Soybean | cytosol, nucleus | 73.47 | 18.09 |
| CDX88999 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 73.47 | 16.59 |
| Bra014558.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 73.47 | 16.59 |
| CDY26360 | Canola | plastid | 73.47 | 15.86 |
| VIT_03s0017g00140.t01 | Wine grape | cytosol | 32.65 | 15.84 |
| Bra017591.1-P | Field mustard | cytosol | 57.14 | 15.73 |
| HORVU7Hr1G062960.1 | Barley | cytosol, mitochondrion, plastid | 30.61 | 15.62 |
| CDX87764 | Canola | mitochondrion | 71.43 | 15.35 |
| VIT_19s0014g02400.t01 | Wine grape | cytosol | 30.61 | 14.15 |
| CDX71934 | Canola | cytosol | 73.47 | 14.12 |
| CDY49245 | Canola | cytosol | 73.47 | 13.9 |
| VIT_17s0053g00180.t01 | Wine grape | cytosol | 32.65 | 13.22 |
| Solyc04g080150.1.1 | Tomato | unclear | 18.37 | 9.18 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 14.29 | 4.67 |
Protein Annotations
| Gene3D:3.30.1440.10 | MapMan:35.1 | UniProt:C5XNJ1 | EnsemblPlants:EES00248 | ProteinID:EES00248 | ProteinID:EES00248.2 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR022803 | PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 | InterPro:Ribosomal_L5 |
| InterPro:Ribosomal_L5_dom_sf | EnsemblPlantsGene:SORBI_3003G057900 | SUPFAM:SSF55282 | UniParc:UPI00081ACFCE | : | : |
Description
hypothetical protein
Coordinates
chr3:+:5114621..5116002
Molecular Weight (calculated)
5593.8 Da
IEP (calculated)
4.412
GRAVY (calculated)
0.167
Length
49 amino acids
Sequence
(BLAST)
(BLAST)
1: MQLLESGLKV NEYELLRRNF SETGCFGFGI QEHIDLGINL VWCLVPNVP
001: MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGIQE
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.