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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH62493 Soybean endoplasmic reticulum, nucleus 83.92 92.27
KRH13277 Soybean cytosol 83.92 92.27
KRH25821 Soybean cytosol 83.92 92.27
KRH55704 Soybean cytosol 83.92 92.27
KRH56423 Soybean cytosol 83.92 92.27
KRH25819 Soybean nucleus 83.42 91.71
KRH55687 Soybean nucleus 83.42 91.71
Bra021990.1-P Field mustard cytosol 81.91 89.56
Bra025058.1-P Field mustard cytosol 81.91 89.56
Os02t0235600-01 Rice cytosol, golgi, nucleus, plasma membrane 81.91 89.56
Bra013342.1-P Field mustard cytosol 81.91 89.56
Bra012580.1-P Field mustard cytosol 81.91 89.56
AT5G45775.2 Thale cress cytosol 81.41 89.01
AT3G58700.1 Thale cress cytosol 81.41 89.01
AT4G18730.1 Thale cress cytosol 81.41 89.01
AT2G42740.1 Thale cress cytosol 81.41 89.01
CDX78887 Canola cytosol 76.88 88.95
CDY00582 Canola cytosol 76.88 88.95
CDY23103 Canola cytosol 76.88 88.95
CDX77611 Canola cytosol 76.88 88.95
CDY39447 Canola cytosol 76.88 88.95
CDY60533 Canola cytosol 76.88 88.95
CDY62552 Canola cytosol 76.88 88.95
CDY64920 Canola cytosol 81.41 88.52
Os05t0207300-01 Rice plasma membrane 80.9 88.46
VIT_12s0028g01800.t01 Wine grape cytosol 76.88 88.44
Solyc12g010930.1.1 Tomato extracellular 80.4 88.4
Solyc10g007980.2.1 Tomato cytosol 80.4 88.4
Solyc07g055230.2.1 Tomato cytosol 80.4 88.4
Solyc02g086240.2.1 Tomato cytosol 80.4 88.4
PGSC0003DMT400067873 Potato cytosol 80.4 88.4
PGSC0003DMT400052643 Potato cytosol 80.4 88.4
PGSC0003DMT400027379 Potato cytosol 80.4 88.4
PGSC0003DMT400020315 Potato cytosol 80.4 88.4
CDX99436 Canola cytosol, extracellular 81.41 88.04
EES04818 Sorghum cytosol 80.4 87.91
Os01t0205500-01 Rice nucleus 80.4 87.91
KXG31594 Sorghum cytosol 80.4 87.91
KXG29884 Sorghum cytosol 80.4 87.91
EES04817 Sorghum cytosol 80.4 87.91
TraesCS1B01G144300.1 Wheat cytosol 72.86 86.31
TraesCS3D01G137600.1 Wheat cytosol, extracellular, golgi 77.39 85.56
HORVU3Hr1G026060.1 Barley cytosol, plasma membrane 77.39 85.56
TraesCS1A01G125100.1 Wheat nucleus 77.39 85.56
TraesCS3A01G136800.1 Wheat cytosol 77.39 85.56
TraesCS3B01G154600.1 Wheat cytosol 77.39 85.56
TraesCS1D01G128800.1 Wheat cytosol, golgi, unclear 76.88 85.0
KRH62765 Soybean cytosol 43.72 84.47
HORVU0Hr1G003140.1 Barley mitochondrion 30.65 83.56
CDX98322 Canola cytosol 60.3 82.76
HORVU1Hr1G032650.1 Barley mitochondrion 37.19 81.32
Bra017591.1-P Field mustard cytosol 72.36 80.9
Os06t0550000-00 Rice plastid 80.4 80.4
HORVU7Hr1G044560.1 Barley mitochondrion 37.69 78.95
KXG20149 Sorghum cytosol 75.88 78.65
EES17871 Sorghum cytosol 30.65 78.21
Bra014558.1-P Field mustard endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 81.91 75.12
CDX88999 Canola endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 81.91 75.12
HORVU1Hr1G028820.1 Barley mitochondrion 76.88 74.27
EES00248 Sorghum cytosol, plastid, vacuole 18.09 73.47
CDY26360 Canola plastid 81.91 71.81
CDX87764 Canola mitochondrion 81.41 71.05
KRH16362 Soybean mitochondrion 31.16 69.66
Solyc04g080150.1.1 Tomato unclear 31.66 64.29
CDX71934 Canola cytosol 81.91 63.92
CDY49245 Canola cytosol 81.91 62.93
HORVU7Hr1G062960.1 Barley cytosol, mitochondrion, plastid 29.15 60.42
KRH12095 Soybean cytosol, plastid, vacuole 8.54 11.33
Protein Annotations
MapMan:17.1.2.1.11Gene3D:3.30.1440.10UniProt:A0A0R0JNS2EMBL:ACUP02004110EnsemblPlantsGene:GLYMA_06G317400GO:GO:0000027
GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003735GO:GO:0005198GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005840
GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016043
GO:GO:0019538GO:GO:0022625GO:GO:0030529InterPro:IPR022803EnsemblPlants:KRH56320ProteinID:KRH56320
ProteinID:KRH56320.1PFAM:PF00281PFAM:PF00673PIRSF:PIRSF002161ScanProsite:PS00358PANTHER:PTHR11994
PANTHER:PTHR11994:SF15InterPro:Ribosomal_L5InterPro:Ribosomal_L5_CInterPro:Ribosomal_L5_CSInterPro:Ribosomal_L5_NInterPro:Ribosomal_L5_dom_sf
SUPFAM:SSF55282UniParc:UPI0006ED74E6SEG:seg:::
Description
hypothetical protein
Coordinates
chr6:+:50608647..50611126
Molecular Weight (calculated)
22935.9 Da
IEP (calculated)
10.232
GRAVY (calculated)
-0.441
Length
199 amino acids
Sequence
(BLAST)
001: MASEKKLSNP MREIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGDKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFF VVLERPGYRV GRRRRCKSRV GIQHRVTKED AMKWFQFRDE GYGLALFKRH FYCKELLNPA LCNDVGQFT
Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.