Factsheet for HORVU1Hr1G032650.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G003140.1	Barley	mitochondrion	73.63	91.78
HORVU7Hr1G044560.1	Barley	mitochondrion	90.11	86.32
EES00248	Sorghum	cytosol, plastid, vacuole	36.26	67.35
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	68.13	64.58
KRH16362	Soybean	mitochondrion	60.44	61.8
CDX98322	Canola	cytosol	80.22	50.34
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	85.71	43.33
CDY62552	Canola	cytosol	81.32	43.02
CDY60533	Canola	cytosol	81.32	43.02
CDY39447	Canola	cytosol	81.32	43.02
CDX77611	Canola	cytosol	81.32	43.02
CDX78887	Canola	cytosol	81.32	43.02
CDY23103	Canola	cytosol	81.32	43.02
CDY00582	Canola	cytosol	81.32	43.02
VIT_12s0028g01800.t01	Wine grape	cytosol	81.32	42.77
AT3G58700.1	Thale cress	cytosol	82.42	41.21
AT2G42740.1	Thale cress	cytosol	82.42	41.21
AT4G18730.1	Thale cress	cytosol	82.42	41.21
AT5G45775.2	Thale cress	cytosol	82.42	41.21
PGSC0003DMT400067873	Potato	cytosol	81.32	40.88
PGSC0003DMT400052643	Potato	cytosol	81.32	40.88
Solyc12g010930.1.1	Tomato	extracellular	81.32	40.88
Solyc10g007980.2.1	Tomato	cytosol	81.32	40.88
PGSC0003DMT400027379	Potato	cytosol	81.32	40.88
PGSC0003DMT400020315	Potato	cytosol	81.32	40.88
Solyc02g086240.2.1	Tomato	cytosol	81.32	40.88
Solyc07g055230.2.1	Tomato	cytosol	81.32	40.88
Solyc04g080150.1.1	Tomato	unclear	43.96	40.82
Bra012580.1-P	Field mustard	cytosol	81.32	40.66
Bra025058.1-P	Field mustard	cytosol	81.32	40.66
Bra021990.1-P	Field mustard	cytosol	81.32	40.66
Bra013342.1-P	Field mustard	cytosol	81.32	40.66
CDY64920	Canola	cytosol	81.32	40.44
KRH55704	Soybean	cytosol	80.22	40.33
KRH62493	Soybean	endoplasmic reticulum, nucleus	80.22	40.33
KRH56423	Soybean	cytosol	80.22	40.33
KRH55687	Soybean	nucleus	80.22	40.33
KRH25821	Soybean	cytosol	80.22	40.33
KRH25819	Soybean	nucleus	80.22	40.33
KRH13277	Soybean	cytosol	80.22	40.33
CDX99436	Canola	cytosol, extracellular	81.32	40.22
VIT_10s0003g01520.t01	Wine grape	cytosol	81.32	39.78
Bra017591.1-P	Field mustard	cytosol	73.63	37.64
HORVU1Hr1G028820.1	Barley	mitochondrion	84.62	37.38
KRH56320	Soybean	cytosol, nucleus	81.32	37.19
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	81.32	34.1
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	81.32	34.1
KRH62765	Soybean	cytosol	38.46	33.98
CDY26360	Canola	plastid	81.32	32.6
CDX87764	Canola	mitochondrion	80.22	32.02
VIT_19s0014g02400.t01	Wine grape	cytosol	34.07	29.25
CDX71934	Canola	cytosol	81.32	29.02
CDY49245	Canola	cytosol	81.32	28.57
VIT_03s0017g00140.t01	Wine grape	cytosol	30.77	27.72
VIT_17s0053g00180.t01	Wine grape	cytosol	18.68	14.05
KRH12095	Soybean	cytosol, plastid, vacuole	12.09	7.33

Protein Annotations

Gene3D:3.30.1440.10	MapMan:35.1	UniProt:A0A287F358	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G032650
EnsemblPlants:HORVU1Hr1G032650.1	InterPro:IPR022803	PFAM:PF00281	PFAM:PF00673	ScanProsite:PS00358	PANTHER:PTHR11994
PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf
SUPFAM:SSF55282	UniParc:UPI000B478D60	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:201597481..201598273

Molecular Weight (calculated)

10410.7 Da

IEP (calculated)

8.488

GRAVY (calculated)

-0.081

Length

91 amino acids

Sequence
(BLAST)

1: NRFCSISLVL EQLSGQSPVF SKARYTVRSF GIMRNEKIAC YVTIRGEKAM QLLESGLKEK EYELLRRNFS DTGCFGFGIQ EHIDLSMLIP L

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.