CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00248	Sorghum	cytosol, plastid, vacuole	35.96	65.31
HORVU0Hr1G003140.1	Barley	mitochondrion	50.56	61.64
HORVU1Hr1G032650.1	Barley	mitochondrion	61.8	60.44
HORVU7Hr1G044560.1	Barley	mitochondrion	62.92	58.95
EES17871	Sorghum	cytosol	44.94	51.28
CDX98322	Canola	cytosol	73.03	44.83
KRH62765	Soybean	cytosol	50.56	43.69
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	43.82	40.62
TraesCS1B01G144300.1	Wheat	cytosol	76.4	40.48
CDY62552	Canola	cytosol	77.53	40.12
CDY60533	Canola	cytosol	77.53	40.12
CDX77611	Canola	cytosol	77.53	40.12
CDX78887	Canola	cytosol	77.53	40.12
CDY39447	Canola	cytosol	77.53	40.12
CDY23103	Canola	cytosol	77.53	40.12
CDY00582	Canola	cytosol	77.53	40.12
VIT_12s0028g01800.t01	Wine grape	cytosol	76.4	39.31
KRH62493	Soybean	endoplasmic reticulum, nucleus	79.78	39.23
KRH56423	Soybean	cytosol	79.78	39.23
KRH55704	Soybean	cytosol	79.78	39.23
KRH55687	Soybean	nucleus	79.78	39.23
KRH25821	Soybean	cytosol	79.78	39.23
KRH13277	Soybean	cytosol	79.78	39.23
KRH25819	Soybean	nucleus	78.65	38.67
AT2G42740.1	Thale cress	cytosol	77.53	37.91
AT3G58700.1	Thale cress	cytosol	77.53	37.91
AT4G18730.1	Thale cress	cytosol	77.53	37.91
AT5G45775.2	Thale cress	cytosol	77.53	37.91
Bra012580.1-P	Field mustard	cytosol	77.53	37.91
Bra013342.1-P	Field mustard	cytosol	77.53	37.91
Bra021990.1-P	Field mustard	cytosol	77.53	37.91
Bra025058.1-P	Field mustard	cytosol	77.53	37.91
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	76.4	37.78
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	76.4	37.78
TraesCS3B01G154600.1	Wheat	cytosol	76.4	37.78
TraesCS3A01G136800.1	Wheat	cytosol	76.4	37.78
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	76.4	37.78
TraesCS1A01G125100.1	Wheat	nucleus	76.4	37.78
CDY64920	Canola	cytosol	77.53	37.7
CDX99436	Canola	cytosol, extracellular	77.53	37.5
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	76.4	37.36
KXG29884	Sorghum	cytosol	76.4	37.36
EES04818	Sorghum	cytosol	76.4	37.36
EES04817	Sorghum	cytosol	76.4	37.36
Solyc12g010930.1.1	Tomato	extracellular	75.28	37.02
Solyc10g007980.2.1	Tomato	cytosol	75.28	37.02
Solyc07g055230.2.1	Tomato	cytosol	75.28	37.02
Solyc02g086240.2.1	Tomato	cytosol	75.28	37.02
PGSC0003DMT400020315	Potato	cytosol	75.28	37.02
PGSC0003DMT400027379	Potato	cytosol	75.28	37.02
PGSC0003DMT400052643	Potato	cytosol	75.28	37.02
PGSC0003DMT400067873	Potato	cytosol	75.28	37.02
KXG31594	Sorghum	cytosol	75.28	36.81
Os01t0205500-01	Rice	nucleus	75.28	36.81
Os05t0207300-01	Rice	plasma membrane	75.28	36.81
Bra017591.1-P	Field mustard	cytosol	69.66	34.83
Os06t0550000-00	Rice	plastid	75.28	33.67
KXG20149	Sorghum	cytosol	71.91	33.33
HORVU1Hr1G028820.1	Barley	mitochondrion	76.4	33.01
Solyc04g080150.1.1	Tomato	unclear	35.96	32.65
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	77.53	31.8
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	77.53	31.8
KRH56320	Soybean	cytosol, nucleus	69.66	31.16
CDY26360	Canola	plastid	77.53	30.4
CDX87764	Canola	mitochondrion	76.4	29.82
CDX71934	Canola	cytosol	77.53	27.06
CDY49245	Canola	cytosol	77.53	26.64
KRH12095	Soybean	cytosol, plastid, vacuole	12.36	7.33

Protein Annotations

Gene3D:3.30.1440.10	MapMan:35.1	UniProt:A0A0R0GDJ6	EMBL:ACUP02008872	EnsemblPlantsGene:GLYMA_14G151200	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR022803	EnsemblPlants:KRH16362	ProteinID:KRH16362	ProteinID:KRH16362.1	PFAM:PF00673
PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282
SignalP:SignalP-noTM	UniParc:UPI0006EDC10A	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:32675777..32676551

Molecular Weight (calculated)

10173.6 Da

IEP (calculated)

9.955

GRAVY (calculated)

0.130

Length

89 amino acids

Sequence
(BLAST)

1: MFFLLLVLTK SYTVRSFGIR RNEKIACYVT IRGNKAMQLL ESGLQVKEYE LLKRNFSDTG CFGFGVHEHI DLGIKTCTRV ILNKSQAIV

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.