Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G58700.1 | Thale cress | cytosol | 100.0 | 100.0 |
| AT5G45775.2 | Thale cress | cytosol | 100.0 | 100.0 |
| AT2G42740.1 | Thale cress | cytosol | 99.45 | 99.45 |
| Bra013342.1-P | Field mustard | cytosol | 99.45 | 99.45 |
| Bra012580.1-P | Field mustard | cytosol | 99.45 | 99.45 |
| CDX78887 | Canola | cytosol | 93.96 | 99.42 |
| CDY62552 | Canola | cytosol | 93.96 | 99.42 |
| CDY64920 | Canola | cytosol | 98.9 | 98.36 |
| CDX99436 | Canola | cytosol, extracellular | 98.9 | 97.83 |
| Solyc07g055230.2.1 | Tomato | cytosol | 95.05 | 95.58 |
| Solyc12g010930.1.1 | Tomato | extracellular | 95.05 | 95.58 |
| Solyc02g086240.2.1 | Tomato | cytosol | 95.05 | 95.58 |
| PGSC0003DMT400067873 | Potato | cytosol | 95.05 | 95.58 |
| PGSC0003DMT400052643 | Potato | cytosol | 95.05 | 95.58 |
| PGSC0003DMT400027379 | Potato | cytosol | 95.05 | 95.58 |
| PGSC0003DMT400020315 | Potato | cytosol | 95.05 | 95.58 |
| Solyc10g007980.2.1 | Tomato | cytosol | 95.05 | 95.58 |
| Os02t0235600-01 | Rice | cytosol, golgi, nucleus, plasma membrane | 95.05 | 95.05 |
| KRH13277 | Soybean | cytosol | 94.51 | 95.03 |
| KRH25821 | Soybean | cytosol | 94.51 | 95.03 |
| KRH55704 | Soybean | cytosol | 94.51 | 95.03 |
| KRH56423 | Soybean | cytosol | 94.51 | 95.03 |
| KRH62493 | Soybean | endoplasmic reticulum, nucleus | 94.51 | 95.03 |
| KRH25819 | Soybean | nucleus | 93.96 | 94.48 |
| KRH55687 | Soybean | nucleus | 93.96 | 94.48 |
| EES04817 | Sorghum | cytosol | 93.96 | 93.96 |
| EES04818 | Sorghum | cytosol | 93.96 | 93.96 |
| Os05t0207300-01 | Rice | plasma membrane | 93.96 | 93.96 |
| KXG29884 | Sorghum | cytosol | 93.96 | 93.96 |
| Os01t0205500-01 | Rice | nucleus | 93.41 | 93.41 |
| KXG31594 | Sorghum | cytosol | 93.41 | 93.41 |
| VIT_10s0003g01520.t01 | Wine grape | cytosol | 93.41 | 91.4 |
| KRH62765 | Soybean | cytosol | 51.65 | 91.26 |
| TraesCS1B01G144300.1 | Wheat | cytosol | 84.07 | 91.07 |
| HORVU3Hr1G026060.1 | Barley | cytosol, plasma membrane | 89.56 | 90.56 |
| TraesCS3B01G154600.1 | Wheat | cytosol | 89.56 | 90.56 |
| TraesCS3D01G137600.1 | Wheat | cytosol, extracellular, golgi | 89.56 | 90.56 |
| TraesCS3A01G136800.1 | Wheat | cytosol | 89.56 | 90.56 |
| TraesCS1A01G125100.1 | Wheat | nucleus | 88.46 | 89.44 |
| TraesCS1D01G128800.1 | Wheat | cytosol, golgi, unclear | 87.91 | 88.89 |
| EES17871 | Sorghum | cytosol | 37.91 | 88.46 |
| Os06t0550000-00 | Rice | plastid | 93.41 | 85.43 |
| HORVU0Hr1G003140.1 | Barley | mitochondrion | 34.07 | 84.93 |
| KXG20149 | Sorghum | cytosol | 88.46 | 83.85 |
| HORVU1Hr1G032650.1 | Barley | mitochondrion | 41.21 | 82.42 |
| KRH56320 | Soybean | cytosol, nucleus | 89.01 | 81.41 |
| GSMUA_Achr9P28800_001 | Banana | cytosol | 13.74 | 80.65 |
| HORVU7Hr1G044560.1 | Barley | mitochondrion | 41.76 | 80.0 |
| HORVU1Hr1G028820.1 | Barley | mitochondrion | 87.91 | 77.67 |
| KRH16362 | Soybean | mitochondrion | 37.91 | 77.53 |
| EES00248 | Sorghum | cytosol, plastid, vacuole | 19.78 | 73.47 |
| Solyc04g080150.1.1 | Tomato | unclear | 37.91 | 70.41 |
| HORVU7Hr1G062960.1 | Barley | cytosol, mitochondrion, plastid | 32.97 | 62.5 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 8.79 | 10.67 |
| Zm00001d000159_P001 | Maize | cytosol | 2.2 | 8.33 |
Protein Annotations
| MapMan:17.1.2.1.11 | Gene3D:3.30.1440.10 | EntrezGene:818874 | EntrezGene:825039 | EntrezGene:827607 | EntrezGene:834617 |
| UniProt:A0A178UAV2 | ProteinID:AED95296.1 | ProteinID:AED95297.1 | ProteinID:AEE79819.1 | ProteinID:AEE84082.1 | EMBL:AF326876 |
| EMBL:AF339697 | EMBL:AF385722 | EMBL:AK228536 | ArrayExpress:AT4G18730 | EnsemblPlantsGene:AT4G18730 | RefSeq:AT4G18730 |
| TAIR:AT4G18730 | RefSeq:AT4G18730-TAIR-G | EnsemblPlants:AT4G18730.1 | TAIR:AT4G18730.1 | EMBL:AY039570 | EMBL:AY078021 |
| EMBL:AY085232 | EMBL:AY086211 | EMBL:AY086300 | EMBL:AY129487 | ProteinID:BAB09220.1 | ProteinID:CAA57396.1 |
| ProteinID:CAB37458.1 | ProteinID:CAB78875.1 | ProteinID:CAB88287.1 | GO:GO:0000027 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0019843 | GO:GO:0022625 | GO:GO:0022626 |
| GO:GO:0030529 | InterPro:IPR022803 | RefSeq:NP_191429.1 | RefSeq:NP_567563.1 | RefSeq:NP_568649.2 | RefSeq:NP_850376.2 |
| RefSeq:NP_851137.1 | ProteinID:OAO90893.1 | ProteinID:OAO99910.1 | ProteinID:OAP02013.1 | ProteinID:OAP10234.1 | UniProt:P42794 |
| PFAM:PF00281 | PFAM:PF00673 | PIRSF:PIRSF002161 | PO:PO:0000016 | PO:PO:0000293 | PO:PO:0009025 |
| ScanProsite:PS00358 | PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 | Symbol:RPL16B | InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_C |
| InterPro:Ribosomal_L5_CS | InterPro:Ribosomal_L5_N | InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 | UniParc:UPI0000132EBB | EMBL:X81798 |
| EMBL:Z29034 | SEG:seg | : | : | : | : |
Description
RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
Coordinates
chr4:+:10302163..10303432
Molecular Weight (calculated)
20862.4 Da
IEP (calculated)
10.484
GRAVY (calculated)
-0.474
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.