CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17871	Sorghum	cytosol	66.02	87.18
EES00248	Sorghum	cytosol, plastid, vacuole	34.95	73.47
TraesCS1B01G144300.1	Wheat	cytosol	90.29	55.36
CDY60533	Canola	cytosol	92.23	55.23
CDY23103	Canola	cytosol	92.23	55.23
CDY00582	Canola	cytosol	92.23	55.23
CDX77611	Canola	cytosol	92.23	55.23
KRH62493	Soybean	endoplasmic reticulum, nucleus	96.12	54.7
KRH13277	Soybean	cytosol	96.12	54.7
KRH25821	Soybean	cytosol	96.12	54.7
KRH55687	Soybean	nucleus	96.12	54.7
KRH55704	Soybean	cytosol	96.12	54.7
KRH56423	Soybean	cytosol	96.12	54.7
CDX78887	Canola	cytosol	91.26	54.65
CDY39447	Canola	cytosol	91.26	54.65
CDY62552	Canola	cytosol	91.26	54.65
VIT_12s0028g01800.t01	Wine grape	cytosol	91.26	54.34
KRH25819	Soybean	nucleus	95.15	54.14
Bra021990.1-P	Field mustard	cytosol	92.23	52.2
AT2G42740.1	Thale cress	cytosol	92.23	52.2
TraesCS1A01G125100.1	Wheat	nucleus	90.29	51.67
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	90.29	51.67
TraesCS3A01G136800.1	Wheat	cytosol	90.29	51.67
TraesCS3B01G154600.1	Wheat	cytosol	90.29	51.67
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	90.29	51.67
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	90.29	51.67
KXG29884	Sorghum	cytosol	91.26	51.65
AT3G58700.1	Thale cress	cytosol	91.26	51.65
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	91.26	51.65
AT4G18730.1	Thale cress	cytosol	91.26	51.65
AT5G45775.2	Thale cress	cytosol	91.26	51.65
EES04818	Sorghum	cytosol	91.26	51.65
Bra012580.1-P	Field mustard	cytosol	91.26	51.65
Bra013342.1-P	Field mustard	cytosol	91.26	51.65
Bra025058.1-P	Field mustard	cytosol	91.26	51.65
EES04817	Sorghum	cytosol	91.26	51.65
CDY64920	Canola	cytosol	91.26	51.37
Os01t0205500-01	Rice	nucleus	90.29	51.1
Os05t0207300-01	Rice	plasma membrane	90.29	51.1
KXG31594	Sorghum	cytosol	90.29	51.1
CDX99436	Canola	cytosol, extracellular	91.26	51.09
PGSC0003DMT400052643	Potato	cytosol	89.32	50.83
Solyc12g010930.1.1	Tomato	extracellular	89.32	50.83
Solyc10g007980.2.1	Tomato	cytosol	89.32	50.83
Solyc07g055230.2.1	Tomato	cytosol	89.32	50.83
Solyc02g086240.2.1	Tomato	cytosol	89.32	50.83
PGSC0003DMT400067873	Potato	cytosol	89.32	50.83
PGSC0003DMT400027379	Potato	cytosol	89.32	50.83
PGSC0003DMT400020315	Potato	cytosol	89.32	50.83
KRH16362	Soybean	mitochondrion	43.69	50.56
KXG20149	Sorghum	cytosol	90.29	48.44
Bra017591.1-P	Field mustard	cytosol	83.5	48.31
Os06t0550000-00	Rice	plastid	90.29	46.73
HORVU1Hr1G028820.1	Barley	mitochondrion	90.29	45.15
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	92.23	43.78
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	92.23	43.78
KRH56320	Soybean	cytosol, nucleus	84.47	43.72
CDY26360	Canola	plastid	92.23	41.85
CDX87764	Canola	mitochondrion	91.26	41.23
CDX98322	Canola	cytosol	56.31	40.0
HORVU1Hr1G032650.1	Barley	mitochondrion	33.98	38.46
HORVU7Hr1G044560.1	Barley	mitochondrion	34.95	37.89
CDX71934	Canola	cytosol	92.23	37.25
CDY49245	Canola	cytosol	92.23	36.68
HORVU0Hr1G003140.1	Barley	mitochondrion	22.33	31.51
Solyc04g080150.1.1	Tomato	unclear	23.3	24.49
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	19.42	20.83
KRH12095	Soybean	cytosol, plastid, vacuole	8.74	6.0

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	UniProt:A0A0R0K7Y8	EMBL:ACUP02002356	EnsemblPlantsGene:GLYMA_04G130200	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR022803	EnsemblPlants:KRH62765	ProteinID:KRH62765	ProteinID:KRH62765.1	PFAM:PF00673
PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282
UniParc:UPI0006EDC892	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:18198406..18200570

Molecular Weight (calculated)

12035.7 Da

IEP (calculated)

9.752

GRAVY (calculated)

-0.336

Length

103 amino acids

Sequence
(BLAST)

001: MQLLESGLKV KEYELLRRNF SDTGCFGFGI QEHIDLGIKY DPSTGIYGMD FFVVLERPGY RVGRRCRCKA RVRIQHRVTK EDAMKWFQVK YEGVILNKSQ
101: ALV

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.